Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1257g00140 ATGGCAGGTATGACCTCCACCAACACCAAGAAGGAGACAGTCGTACATTTGGGATCCTACATACGCGTCTACAATGATGGTTCCATTGAACGTCCCTTGAACATCCCAAGATGTCCCCCTTCCCCCGAAGACCCAGCAACTGGTGTCTCATCCAAAGACATTCTCTTCTCAAAGAACCCTTACCTCGCTGCTCGGCTTTTCCTTCCAAAGCTATCTCAATCCAATCACAACCACAAACTCTCCATCTTGGTCTACTTTCATGGCGGTGCTTTTTGCTTTGAATCAGCCTTTGCATCGCACCATGTCAAATACTGCAACCTTTTAGCTTCTCAAGCGAATGTTGTGATTGTTTCCGTAGAGCACAGGAAAGCTCCGGAGCATTTTCTCCCAACAGCTTATGACGATTGTTGGGCTGGTCTCTACTGGGTTGCATCCCATGCCACCGCTAACCCCACCAACAGCGACCCATGGCTGATGAATCATGGCGATTTCAACAAAATTTTCATAGGAGGTGACAGCAGTGGTGGTAATATTGTTCATAACGTTGCCATGCGTGCTGGGGTTGAAGCTTTACCCGGTGGTGTGAAATTATATGGTGCTTATCTTAACCACCCCTACTTTTGGGGTTCAAAGCCAATTGGGTCTGAACCTGTTATGGGGTTCGAGGAGACATATCAGTCTCTGATTTGGAACTTTGCGTACCCTTCTGCTCCTGGTGGGTTAGATAACCCCATGATCAATCCATTGGCTCCTGGGGCACCCAGTTTGGCTACACTCGGGTGTTCTAAGATGCTTGTTACTGTTGCTGGCAAGGATCACCTGCACTTTAGGTACAGAGCAGTGTTGTATTATGAAGCTGTGAAGGGGAGCGGGTGGAAAGGGGAAATAGAACTCTTTGAAGAGGAAGAAGAGGATCATGTTTATCACATGTTCAATATGGAAACTGAGCAAGCCAAGAGATTGATAAAAGTTGTGGTTGATTTTCTTCGTATGACCTCCACCAACACCAAGAAGGAGACAGTCGTACATTTGGGATCCTACATACGCGTCTACAATGATGGTTCCATTGAACGTCCCTTGAACATCCCAAGATGTCCCCCTTCCCCCGAAGACCCAGCAACTGGTGTCTCATCCAAAGACATTCTCTTCTCAAAGAACCCTTACCTCGCTGCTCGGCTTTTCCTTCCAAAGCTATCTCAATCCAATCACAACCACAAACTCTCCATCTTGGTCTACTTTCATGGCGGTGCTTTTTGCTTTGAATCAGCCTTTGCATCGCACCATGTCAAATACTGCAACCTTTTAGCTTCTCAAGCGAATGTTGTGATTGTTTCCGTAGAGCACAGGAAAGCTCCGGAGCATTTTCTCCCAACAGCTTATGATGATTGTTGGGCTGGTCTCTACTGGGTTGCATCCCATGCCACCGCTAACCCCACCAACAGCGACCCATGGCTGATGAATCATGGCGACTTCAACAAAGTTTTCATAGGAGGTGACAGCAGTGGTGGTAATATTGTTCATAACGTTGCCATGCGTGCTGGGGTTGAAGCTTTACCCGGTGGTGTGAAATTATATGGTGCTTATCTTAACCACCCCTACTTTTGGGGTTCAAAGCCAATTGGGTCTGAACCTGTTATGGGGTTCGAGGAGACATATCAGTCTCTGATTTGGAACTTTGCGTACCCTTCTGCTCCTGGTGGGTTAGATAACCCCATGATCAATCCATTGGCTCCTGGGGCACCCAGTTTGGCTACACTCGGGTGTTCTAAGATGCTTGTTACTGTTGCTGGCAAGGATCACCTGCACTTCAGGTACAGAGCAGTGTTGTATTATGAAGCTGTGAAGGGGAGCGGGTGGAAAGGGGAAATAGAACTCTTTGAAGAGGAAGAAGAGGATCATGTTTATCACATGTTCAATATGGAAACTGAGCAAGCCAAAAGATTGATAAAAGTTGTGGTTGATTTTCTTCGACAGTGA 1977 0.4689 MAGMTSTNTKKETVVHLGSYIRVYNDGSIERPLNIPRCPPSPEDPATGVSSKDILFSKNPYLAARLFLPKLSQSNHNHKLSILVYFHGGAFCFESAFASHHVKYCNLLASQANVVIVSVEHRKAPEHFLPTAYDDCWAGLYWVASHATANPTNSDPWLMNHGDFNKIFIGGDSSGGNIVHNVAMRAGVEALPGGVKLYGAYLNHPYFWGSKPIGSEPVMGFEETYQSLIWNFAYPSAPGGLDNPMINPLAPGAPSLATLGCSKMLVTVAGKDHLHFRYRAVLYYEAVKGSGWKGEIELFEEEEEDHVYHMFNMETEQAKRLIKVVVDFLRMTSTNTKKETVVHLGSYIRVYNDGSIERPLNIPRCPPSPEDPATGVSSKDILFSKNPYLAARLFLPKLSQSNHNHKLSILVYFHGGAFCFESAFASHHVKYCNLLASQANVVIVSVEHRKAPEHFLPTAYDDCWAGLYWVASHATANPTNSDPWLMNHGDFNKVFIGGDSSGGNIVHNVAMRAGVEALPGGVKLYGAYLNHPYFWGSKPIGSEPVMGFEETYQSLIWNFAYPSAPGGLDNPMINPLAPGAPSLATLGCSKMLVTVAGKDHLHFRYRAVLYYEAVKGSGWKGEIELFEEEEEDHVYHMFNMETEQAKRLIKVVVDFLRQ 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1257g00140 658 Pfam alpha/beta hydrolase fold 410 636 IPR013094 GO:0016787
Gabi1257g00140 658 Pfam alpha/beta hydrolase fold 83 309 IPR013094 GO:0016787
Gabi1257g00140 658 Gene3D alpha/beta hydrolase 20 345 IPR029058 -
Gabi1257g00140 658 Gene3D alpha/beta hydrolase 351 658 IPR029058 -
Gabi1257g00140 658 SUPERFAMILY alpha/beta-Hydrolases 351 658 IPR029058 -
Gabi1257g00140 658 Coils Coil 658 658 - -
Gabi1257g00140 658 PANTHER ARYLACETAMIDE DEACETYLASE 346 642 - -
Gabi1257g00140 658 SUPERFAMILY alpha/beta-Hydrolases 24 330 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1257g00140 Gabi-Chr1257 1285349 1296441 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1257g00140 339 657 Carbohydrate Esterase AT3G48690 38.462 4.38e-65 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1257g00140 - K13258 aprc:113873855 742.651