Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1257g00132 ATGATGCTACAAACCATTGTGACTGTGGTTCTTCTCCTTATGCTTCTTCTCATCATCATCTTCCTCTTGTTTCTCTTCAAACCATGGCGCTTCTTATTTTCTTCGCGTTCCCGCTCCTCCATCAAGGGTGAGCTAGAGAGGCCCCTTGTCGCAGATGAAGACGATGATAATGTAAATGTATCATTTAATCAGAACAATGAATTGCCTAGAGATTATGATCTTGAGGGTGCTTGCTATCCCAATGAATCTCATTTTCGCTCACCTCTAACCCATGGCCATGGACTTATTCATAAGCAAAGGCTTTCACCTAATATGCCCCAAGGTGATACTTTGGCTATTAATGTAATCTCTGATCCTTCTGAAGATGTTGATTTTGGTCAAACACTTAAGCTTCCTCCAGCTCACTATGCTCAAATTCAAAAGCATGGCACTCCCAATTTTCAAAATGATAGGCTGCAAGACTTTGTGCAAAGAGATATCATTGATCAAAGAAGTTGCCTCACTCTGGAGGTTATCAGTGGTCCTTCTTGTGGACTTCGTTGTTCTGTACAGTCAACAAGCTCTTCTCGTCTACCGTTAACCTTGGGAAGAGTTTCTCCAAGTGATTTATTGATAAAGGATTCAGAAGTTTCAGGAAAGCATGCATTGATAAAGTGGAATTTAGATAAAATGAAATGGGAGTTGGTCGATATGGGTAGCCTAAATGGAACATTTCTGAATTCCAACCCAATCAACCATCCAGACACTGGAAGTAGGCATTGGGGAGATCCAATGAATCTTGCAAATGGAGATATTATAACACTTGGAACGACATCAAAAGTACTTGTTCATATTACTTCGCAAAATCAGCATCACATTCCCTTTGGAGTTGGTATGGCATCAGATCCCATGGCTTTGCGTCGAGGGGGAAAAAAGCTTGCTATGGAAGATGTTTGCTATTGTCAATGGCCTCTACCCGGGCTGGATCAGTTTGGAATTTTTGGCATTTGTGATGGGCATGGAGGAGATGGGGCTGCCAAATCTGCAAGCAAACTTTTTCCTGAGATAATTGCCAGTATATTATCGGATTCATTAAAAAGGGAGAGGGTTTTATCACTCCGTGATGCTTCAGATATTCTTCGAGATGCATTTTCTCAAACAGAAGCATGTATGAATCACTATTATGAGGGATGTACAGCAACAGTGCTTTTGGTGTGGGCTGATGGCGATGAAAATTTCTTTGCACAATGTGCAAATGTTGGAGACTCCGCGTGTGTTATGAGTGTCAATGGGAAACAAATCAAGATGACAGAAGATCACAAGATAGCAAATTATTCTGAAAGACTCAGGATTGAAGGGACAGGTGAACCATTGAAAGATGGGGAAACACGTCTATATGGTTTAAATCTTGCAAGGATGCTTGGGGATAAATTCCTGAAACAGCAGGATTCTCGGTTCAGTTCAGAACCTTATATAAGTGAAGTCGTGCACATTGATCAATCAAACAGCGCTTTTGCTGTTCTAGCTAGTGATGGTTTATGGGATGTCATCAGCGTCAAGAAGGCAATTCAGCTAGTGCTCCAGATGAGGGAGAGATATTATACAGAGAGAGAGAATACAGCAGAAAAGATTGCTAGTTTGTTGTTGAGTGAGGCTAAAACACTCAAAACAAAGGATAATACCTCTGTAATTTTCTTAGATTTTGATACCTTTAACAGATTCTCTTGTAAAGTTGAATCCTAG 1722 0.4071 MMLQTIVTVVLLLMLLLIIIFLLFLFKPWRFLFSSRSRSSIKGELERPLVADEDDDNVNVSFNQNNELPRDYDLEGACYPNESHFRSPLTHGHGLIHKQRLSPNMPQGDTLAINVISDPSEDVDFGQTLKLPPAHYAQIQKHGTPNFQNDRLQDFVQRDIIDQRSCLTLEVISGPSCGLRCSVQSTSSSRLPLTLGRVSPSDLLIKDSEVSGKHALIKWNLDKMKWELVDMGSLNGTFLNSNPINHPDTGSRHWGDPMNLANGDIITLGTTSKVLVHITSQNQHHIPFGVGMASDPMALRRGGKKLAMEDVCYCQWPLPGLDQFGIFGICDGHGGDGAAKSASKLFPEIIASILSDSLKRERVLSLRDASDILRDAFSQTEACMNHYYEGCTATVLLVWADGDENFFAQCANVGDSACVMSVNGKQIKMTEDHKIANYSERLRIEGTGEPLKDGETRLYGLNLARMLGDKFLKQQDSRFSSEPYISEVVHIDQSNSAFAVLASDGLWDVISVKKAIQLVLQMRERYYTERENTAEKIASLLLSEAKTLKTKDNTSVIFLDFDTFNRFSCKVES 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1257g00132 573 PANTHER PROTEIN PHOSPHATASE 2C 300 558 IPR015655 GO:0004722|GO:0006470
Gabi1257g00132 573 FunFam Protein phosphatase 2C 70 162 296 - -
Gabi1257g00132 573 ProSiteProfiles Forkhead-associated (FHA) domain profile. 193 244 IPR000253 GO:0005515
Gabi1257g00132 573 SUPERFAMILY SMAD/FHA domain 165 276 IPR008984 GO:0005515
Gabi1257g00132 573 SMART FHA_2 192 244 IPR000253 GO:0005515
Gabi1257g00132 573 CDD FHA_PP2C70-like 167 277 - -
Gabi1257g00132 573 SUPERFAMILY PP2C-like 302 562 IPR036457 -
Gabi1257g00132 573 ProSitePatterns PPM-type phosphatase domain signature. 326 334 IPR000222 GO:0043169
Gabi1257g00132 573 ProSiteProfiles PPM-type phosphatase domain profile. 289 561 IPR001932 -
Gabi1257g00132 573 Gene3D - 161 296 - -
Gabi1257g00132 573 Pfam Protein phosphatase 2C 301 554 IPR001932 -
Gabi1257g00132 573 SMART PP2C_4 283 559 IPR001932 -
Gabi1257g00132 573 CDD PP2Cc 301 561 IPR001932 -
Gabi1257g00132 573 FunFam Protein phosphatase 2C 70 297 568 - -
Gabi1257g00132 573 Pfam FHA domain 194 269 IPR000253 GO:0005515
Gabi1257g00132 573 Gene3D - 297 569 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1257g00132 Gabi-Chr1257 1218278 1228523 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1257g00132 1 563 PP2C-type Phosphatase Gene Family AT5G19280 57.576 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1257g00132 K01090 - gmx:100170643 934.865