Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1257g00131 ATGATGCTACAAACCATTGTGACTGTGGTTCTTCTCCTTATGCTTCTTCTCATCATCATCTTCCTCTTGTTTCTCTTCAAACCATGGCGCTTCTTATTTTCTTCGCGTTCCCGCTCCTCCATCAAGGGTGAGCTAGAGAGGCCCCTTGTCGCAGATGAAGACGATGATAATGTAAATGTATCATTTAATCAGAACAATGAATTGCCTAGAGATTATGATCTTGAGGGTGCTTGCTATCCCAATGAATCTCATTTTCGCTCACCTCTAACCCATGGCCATGGACTTATTCATAAGCAAAGGCTTTCACCTAATATGCCCCAAGGTGATACTTTGGCTATTAATGTAATCTCTGATCCTTCTGAAGATGTTGATTTTGGTCAAACACTTAAGCTTCCTCCAGCTCACTATGCTCAAATTCAAAAGCATGGCACTCCCAATTTTCAAAATGATAGGCTGCAAGACTTTGTGCAAAGAGATATCATTGATCAAAGAAGTTGCCTCACTCTGGAGGTTATCAGTGGTCCTTCTTGTGGACTTCGTTGTTCTGTACAGTCAACAAGCTCTTCTCGTCTACCGTTAACCTTGGGAAGAGTTTCTCCAAGTGATTTATTGATAAAGGATTCAGAAGTTTCAGGAAAGCATGCATTGATAAAGTGGAATTTAGATAAAATGAAATGGGAGTTGGTCGATATGGGTAGCCTAAATGGAACATTTCTGAATTCCAACCCAATCAACCATCCAGACACTGGAAGTAGGCATTGGGGAGATCCAATGAATCTTGCAAATGGAGATATTATAACACTTGGAACGACATCAAAAGTACTTGTTCATATTACTTCGCAAAATCAGCATCACATTCCCTTTGGAGTTGGTATGGCATCAGATCCCATGGCTTTGCGTCGAGGGGGAAAAAAGCTTGCTATGGAAGATGTTTGCTATTGTCAATGGCCTCTACCCGGGCTGGATCAGTTTGGAATTTTTGGCATTTGTGATGGGCATGGAGGAGATGGGGCTGCCAAATCTGCAAGCAAACTTTTTCCTGAGATAATTGCCAGTATATTATCGGATTCATTAAAAAGGGAGAGGGTTTTATCACTCCGTGATGCTTCAGATATTCTTCGAGATGCATTTTCTCAAACAGAAGCATGTATGAATCACTATTATGAGGGATGTACAGCAACAGTGCTTTTGGTGTGGGCTGATGGCGATGAAAATTTCTTTGCACAATGTGCAAATGTTGGAGACTCCGCGTGTGTTATGAGGTCTGTTTCACTATTAATTATTTTTGGCAGTGTCAATGGGAAACAAATCAAGATGACAGAAGATCACAAGATAGCAAATTATTCTGAAAGACTCAGGATTGAAGGGACAGGTGAACCATTGAAAGATGGGGAAACACGTCTATATGGTTTAAATCTTGCAAGGATGCTTGGGGATAAATTCCTGAAACAGCAGGATTCTCGGTTCAGTTCAGAACCTTATATAAGTGAAGTCGTGCACATTGATCAATCAAACAGCGCTTTTGCTGTTCTAGCTAGTGATGGTTTATGGGATGTCATCAGCGTCAAGAAGGCAATTCAGCTAGTGCTCCAGATGAGGGAGAGATATTATACAGAGAGAGAGAATACAGCAGAAAAGATTGCTAGTTTGTTGTTGAGTGAGGCTAAAACACTCAAAACAAAGGATAATACCTCTGTAATTTTCTTAGATTTTGATACCTTTAACAGATTCTCTTGTAAAGTTGAATCCTAG 1752 0.4053 MMLQTIVTVVLLLMLLLIIIFLLFLFKPWRFLFSSRSRSSIKGELERPLVADEDDDNVNVSFNQNNELPRDYDLEGACYPNESHFRSPLTHGHGLIHKQRLSPNMPQGDTLAINVISDPSEDVDFGQTLKLPPAHYAQIQKHGTPNFQNDRLQDFVQRDIIDQRSCLTLEVISGPSCGLRCSVQSTSSSRLPLTLGRVSPSDLLIKDSEVSGKHALIKWNLDKMKWELVDMGSLNGTFLNSNPINHPDTGSRHWGDPMNLANGDIITLGTTSKVLVHITSQNQHHIPFGVGMASDPMALRRGGKKLAMEDVCYCQWPLPGLDQFGIFGICDGHGGDGAAKSASKLFPEIIASILSDSLKRERVLSLRDASDILRDAFSQTEACMNHYYEGCTATVLLVWADGDENFFAQCANVGDSACVMRSVSLLIIFGSVNGKQIKMTEDHKIANYSERLRIEGTGEPLKDGETRLYGLNLARMLGDKFLKQQDSRFSSEPYISEVVHIDQSNSAFAVLASDGLWDVISVKKAIQLVLQMRERYYTERENTAEKIASLLLSEAKTLKTKDNTSVIFLDFDTFNRFSCKVES 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1257g00131 583 Gene3D - 161 296 - -
Gabi1257g00131 583 SMART PP2C_4 283 569 IPR001932 -
Gabi1257g00131 583 ProSiteProfiles Forkhead-associated (FHA) domain profile. 193 244 IPR000253 GO:0005515
Gabi1257g00131 583 SMART FHA_2 192 244 IPR000253 GO:0005515
Gabi1257g00131 583 SUPERFAMILY SMAD/FHA domain 165 276 IPR008984 GO:0005515
Gabi1257g00131 583 CDD FHA_PP2C70-like 167 277 - -
Gabi1257g00131 583 Pfam FHA domain 194 269 IPR000253 GO:0005515
Gabi1257g00131 583 FunFam Protein phosphatase 2C 70 162 296 - -
Gabi1257g00131 583 Pfam Protein phosphatase 2C 301 564 IPR001932 -
Gabi1257g00131 583 ProSitePatterns PPM-type phosphatase domain signature. 326 334 IPR000222 GO:0043169
Gabi1257g00131 583 PANTHER PROTEIN PHOSPHATASE 2C 300 568 IPR015655 GO:0004722|GO:0006470
Gabi1257g00131 583 SUPERFAMILY PP2C-like 302 572 IPR036457 -
Gabi1257g00131 583 Gene3D - 297 581 IPR036457 -
Gabi1257g00131 583 ProSiteProfiles PPM-type phosphatase domain profile. 289 571 IPR001932 -
Gabi1257g00131 583 FunFam Protein phosphatase 2C 70 297 578 - -
Gabi1257g00131 583 CDD PP2Cc 301 571 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1257g00131 Gabi-Chr1257 1218278 1228523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1257g00131 1 573 PP2C-type Phosphatase Gene Family AT5G19280 57.744 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1257g00131 K01090 - gmx:100170643 926.776