Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1257g00081 ATGGCATCAGCAATGCTGCCAGCTTTTCAGTGCCAAAACAACTTCCACTTGGCTACTCATAGCAAGTGCATCAAAATCTTTTGGGGCTTATTTTTCTTATTTGCTCTATCCAACTCAGTTGCATCAAAAGCCATTGTCAAGAACTTACCAGGCTTCCCTGGGGAGCTACCATTCGTACTTGAAACAGGATACATAAGCGTGAACGATTCTGAACTATTCTACTACTTCATCGAATCACAAGGAAACCCTCAAGAGGACCCTCTATTTCTTTGGTTAACGGGAGGCCCTGGTTGTTCTTCTCTCTGCGGAATTCTTTATGAAATAGGTCCTATAGAATTTGATATTAGTAACTACATTGGGGGATTACCAAAATTGGCATATTATCCGTATGCATGGACAAAGACTGCTAGCATCATATTTCTTGATTCGCCCGTGGGAACTGGCTTCTCCTATTCGATAACTACACAAGGTTGGGCGACTTCGGACTCAGCATCAGCAGAGCAAGCCTATCAGTTCCTCAGGAAGTGGTTGGAAGAAAACCCACAGTATCTCTCAAACAAACTGTTTATTGGGGGTGATTCTTATTCGGGCATAATTGTTCCTTTGATTACAAAGATGGTTGTAGAAGATAATGAAGCTGGATTGCAGCCTCGGTTGAATCTCAAAGGCTATTTGGTAGGGAGCCCTCGCACCGATGAGTTTATCAACAGTAATTCAATAATGCCATTTGCTCACCGCATGGCACTTATATCAGACGAGCTCTATGAGAAACTAAAATCAAGTTGCAATGGGAACTATGTGGTCGTGGATCCATCAAATGAAGAATGTCTTGCTGCTATTGTCGAGTACGAGAAGTGCATCGAAGCTATATGGCCCAATAACATTTTGGAACCCAACTGTGAATTTGCATCTCCCCAGCCACTCGAAGAAAATCGTCCAGATTTTGTGCTTTCCCCACCAAGAATTTCAGAACTATGGTGTCGGGTTTTTAACTATGCACTATCTTACACTTGGGCAAATGATGGTAGCGTTCAAGAAGCCTTGCATGTTCGAAAGGGTAAAGTGAAGGAATGGGATCGGTGCAACAAGAGCCTCTCATACACTTATGATGTCAAAAGTGTGATCCATGTTCACCAATGGCTCAGCAAAAGGAACTTAATGCTTCTCGTTGAGGGTGGTGACCGCGATATGATTATTACCTTTGTGGCTACTGACATATGGATAAGGACTCTAAACTTGACTGTTGTCGATGAATGGCGACCATGGTTTGTTGATGACCAAGTTGCAGGTTACACAAGAAAGTATTCAGAAAACGGATTTGGTTTAACATACGTAACTGTGAAAGGTGGGGGACACACAGCTCCGGAGTACTACCGTAGAGAATGTTATGAGATGTTTCAGAGGTGGCTCCATGCCTACCCAGTATAA 1428 0.43 MASAMLPAFQCQNNFHLATHSKCIKIFWGLFFLFALSNSVASKAIVKNLPGFPGELPFVLETGYISVNDSELFYYFIESQGNPQEDPLFLWLTGGPGCSSLCGILYEIGPIEFDISNYIGGLPKLAYYPYAWTKTASIIFLDSPVGTGFSYSITTQGWATSDSASAEQAYQFLRKWLEENPQYLSNKLFIGGDSYSGIIVPLITKMVVEDNEAGLQPRLNLKGYLVGSPRTDEFINSNSIMPFAHRMALISDELYEKLKSSCNGNYVVVDPSNEECLAAIVEYEKCIEAIWPNNILEPNCEFASPQPLEENRPDFVLSPPRISELWCRVFNYALSYTWANDGSVQEALHVRKGKVKEWDRCNKSLSYTYDVKSVIHVHQWLSKRNLMLLVEGGDRDMIITFVATDIWIRTLNLTVVDEWRPWFVDDQVAGYTRKYSENGFGLTYVTVKGGGHTAPEYYRRECYEMFQRWLHAYPV 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1257g00081 475 Pfam Serine carboxypeptidase 50 471 IPR001563 GO:0004185|GO:0006508
Gabi1257g00081 475 Gene3D alpha/beta hydrolase 53 474 IPR029058 -
Gabi1257g00081 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 45 457 IPR001563 GO:0004185|GO:0006508
Gabi1257g00081 475 FunFam Serine carboxypeptidase-like 19 39 306 - -
Gabi1257g00081 475 FunFam Carboxypeptidase 326 475 - -
Gabi1257g00081 475 SUPERFAMILY alpha/beta-Hydrolases 46 473 IPR029058 -
Gabi1257g00081 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Gabi1257g00081 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Gabi1257g00081 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Gabi1257g00081 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1257g00081 Gabi-Chr1257 713970 723086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1257g00081 338 475 Calmodulin-binding Proteins AT2G22960 46.377 2.40e-38 136