Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1257g00057 ATGAGCTGCAACGGTTGCCGTGTCCTCCGAAAAGGTTGCAGCGAAGAGTGCTTGCTGAGAGAATGCCTGAAGTGGACAGAGAACCCAGAAGCGCAGGGTCATGCCACACTCTTCGTCGCCAAGTTCTTTGGCCGTGCTACCCTCATGTCTTTCCTTTCCTCCGTACCCCCCAACCAAACATCCGCTCTGTTTCGGTCACTTATGTATGAGGCAGTGGGACGTACCTTGAACCCAGTAAACGGAGCAGTGGGACTGCTATGGAGTGGAAACTGGCACCTCTGCCAGTTGGGGGTCGAGAAAGTTCTGAGAGGTTGTGTGTTGAGTCCTCTCTTCGATGATTCTGCTGCTCATCCGGCCCATCACCGATCAACCATGCTCGACGCAGAACTTGCTCCTGACAGATTGGTGGTTGACACGCGTCACCGGACACCATCAGAGGAATCAGAGACGACCACGTTGGAAAGTACAACTGCCTGTGAAAAGAAGCTGCTTCAACTATTCTTCTGA 507 0.5306 MSCNGCRVLRKGCSEECLLRECLKWTENPEAQGHATLFVAKFFGRATLMSFLSSVPPNQTSALFRSLMYEAVGRTLNPVNGAVGLLWSGNWHLCQLGVEKVLRGCVLSPLFDDSAAHPAHHRSTMLDAELAPDRLVVDTRHRTPSEESETTTLESTTACEKKLLQLFF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1257g00057 168 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Gabi1257g00057 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 127 - -
Gabi1257g00057 168 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1257g00057 Gabi-Chr1257 503848 505421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1257g00057 1 110 AS2 family AT3G49940 73.636 1.12e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi1257g00057 LOB 1e-24 No_clan