Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1257g00047 ATGGCTGAACAGGAAAACAACTGCAAACGGCCGGCGACTCACCCTCCGGAGTTAACTGCGGCGAAGAGGCGGACGGTGCTGAGCGATCTCACCAATTTTGCCAGGAAAACTATAACCAAGAAGAAGACTGAGATAAAGATGACGCACAACACCAATCACCTGTCTTCTTTTTCTTTCATGTACAACCATCTTCATGCCTTGGAGATGGAGGTGAATAGGAGGCCATTGCCCAATTATATGGAGACAGTTCAGACAGATCTTACAAGCAATATGCGCAGAATTCTGGTGGATTGGTTAGCGGAGGTTGTTAATGGATGCAAGTCTGTTCCCGATACCCTTCATCTTGCTGTTTCTTGCCTTGATCGCTTCCTCTCTGCTCGTCCTATCAAACGGAATCACCTCCAGCTTCTTGGTGTTTCTTGCTTGCTTATTGCCGCGAAACGTGAAGAGATTAATATTCCACATGTGGAAGGCTTCTGCTTCATGACAGATAACGCTTATACCCCCAGAGAGGTTATGGATATGGAGGGTGAGGTCCTCAGAACCTTGAACCCTGACTTGGGCAATCCAACCGCTAAAACATTTCTCAGGCAAGAAATTAAATGTTTCTCATTACAATTGGAGTTGTTGGCTTATTATCTACTGGAGCTATGCCTGTTGGAATATGAGTGCATTAAATTCTTACCATCAGTGGCTGCAGCATCGGCTGTATTTCTATCCAGGTTCATAATTGAACCAAGGAAGCATCCATGGAACCTACTGTTACAACGCAAAACCGGTTATAAGCCATGTGACCTGAAGGAATGTGTCCTTGCCATACATGCGGTGCACTCGACAATCAAAGAAAGTCCTTTACGAGGGATACGAGAAAAATAC 876 0.4521 MAEQENNCKRPATHPPELTAAKRRTVLSDLTNFARKTITKKKTEIKMTHNTNHLSSFSFMYNHLHALEMEVNRRPLPNYMETVQTDLTSNMRRILVDWLAEVVNGCKSVPDTLHLAVSCLDRFLSARPIKRNHLQLLGVSCLLIAAKREEINIPHVEGFCFMTDNAYTPREVMDMEGEVLRTLNPDLGNPTAKTFLRQEIKCFSLQLELLAYYLLELCLLEYECIKFLPSVAAASAVFLSRFIIEPRKHPWNLLLQRKTGYKPCDLKECVLAIHAVHSTIKESPLRGIREKY 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1257g00047 292 SMART cyclin_7 194 275 IPR013763 -
Gabi1257g00047 292 SMART cyclin_7 97 181 IPR013763 -
Gabi1257g00047 292 Pfam Cyclin, C-terminal domain 190 292 IPR004367 -
Gabi1257g00047 292 SUPERFAMILY Cyclin-like 190 292 IPR036915 -
Gabi1257g00047 292 SMART Cyclin_C_2 190 292 IPR004367 -
Gabi1257g00047 292 FunFam G2/mitotic-specific cyclin 75 188 - -
Gabi1257g00047 292 SUPERFAMILY Cyclin-like 63 187 IPR036915 -
Gabi1257g00047 292 Pfam Cyclin, N-terminal domain 67 187 IPR006671 -
Gabi1257g00047 292 PIRSF Cyclin_A_B_D_E 1 292 IPR046965 GO:0016538|GO:0044772
Gabi1257g00047 292 PANTHER CYCLINS 60 275 IPR039361 -
Gabi1257g00047 292 Gene3D - 75 188 - -
Gabi1257g00047 292 Gene3D - 61 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1257g00047 Gabi-Chr1257 432174 433844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1257g00047 1 292 Core Cell Cycle Gene Families AT5G43080 42.769 2.11e-83 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1257g00047 K06627 - qsa:O6P43_011784 275.018