Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1257g00029 ATGGGCATCATCATGTCGGTGCGCGTGTTAATATTGTTATATACTTTCTTGGTTGTTGCGGCCGCATCGGAAAGAGAAGCATTAGAAATTATGACAGGAGGTGGCGGAGGTTATGTTTATGGTTCTCCTCCTCCTCCTTCTCCTTCCCCATCTGGATGTTCCCCACTGCCACCACCGCCGCCACCCCCTCGGTGCCCACCAACCATGACCCGGTTGCAGAAAGCTCGCTCTGTGCTTCTAAAATTCGCAAGTTCTATCAATGACACAAGTGGATATACGAAAAACTGGAAGGAAGCAAAAAACCCTTGTAAATTTAATGGGGTCCGATGTGCCAAGTATCCAAACACAAGTGAGTTAGCAGTTGCGGGACTAAACCTGAATGGAGCCAGCATCTCTGGTCTCAACCGTAAAAATGTGAGCCTCTCCGGTATATTGAACAAGTTACAAGAGTTGACATTCTTCCACGTGAACTCCAACAACTTCGCCGGCCCAATCCCAAATGAAATCATCCGTTACCCCTATTTCTTCGAGCTAGACCTCAGTAACAACAAACTTGAGGGCCAGTTTCCAATGCAAGTGCTTCAGTCCAAGCAACTTGTCTTCTTGGACCTCAGGTTCAACAATCTCTATGGTCCAATTCCACCACAACTCTTCCTGTTGGATCTCGACGTGATTTTCATCAACAACAATGACTTCAGCGGCTATCTCCCAGATAATTTTGGGTCCACACCGGCCAGGTTCCTTTCTTTTGCCAACAACAAACTCGCCGGCCCGATTCCCCAAAGCATTGGCAACGCTTCCAAAACCCTCACCGAAGTACTCTTCTTGGGCAACAACATTGAGGGGTGCTTGCCCTACGAAATTGGGTACCTCAAAATGGCCACCGTCTTTGATGTGAGCAAAAACTGCTTAACGGGTCCCATCCCTCTCTCCTTTGCCTGCTTGGAAAAGATTCAGTTCCTGAATTTGGAGCACAACCAGTTTTACGGAACTGTTCCGGAGATGGTTTGTGAGCTGCCGGGGCTCCGCAACGGGGGCAACCTGTCGTTATCGAACAACTATTTCACGCAAGTTGGTCCTGAATGCAGGAAGCTGATAGAGGCCAAAGTGCTGGACGTGAGCAACAATTGCATCCTGGGTCTTCCAAATCAAAAACCATACGAACAGTGCTCTGAATTTTTCTCCAAGGTCAAGCCCTGCCCAAATCCCAAGTATCTCAGTTACATCCCTTGTAAGGGATACTTCTCGCGGTCGACCACGCACACCACCGCCGCGCCTGCGCCCGTCACTTACAACACTCTCAAACCACATCGGTTGTGA 1320 0.4894 MGIIMSVRVLILLYTFLVVAAASEREALEIMTGGGGGYVYGSPPPPSPSPSGCSPLPPPPPPPRCPPTMTRLQKARSVLLKFASSINDTSGYTKNWKEAKNPCKFNGVRCAKYPNTSELAVAGLNLNGASISGLNRKNVSLSGILNKLQELTFFHVNSNNFAGPIPNEIIRYPYFFELDLSNNKLEGQFPMQVLQSKQLVFLDLRFNNLYGPIPPQLFLLDLDVIFINNNDFSGYLPDNFGSTPARFLSFANNKLAGPIPQSIGNASKTLTEVLFLGNNIEGCLPYEIGYLKMATVFDVSKNCLTGPIPLSFACLEKIQFLNLEHNQFYGTVPEMVCELPGLRNGGNLSLSNNYFTQVGPECRKLIEAKVLDVSNNCILGLPNQKPYEQCSEFFSKVKPCPNPKYLSYIPCKGYFSRSTTHTTAAPAPVTYNTLKPHRL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1257g00029 439 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 423 - -
Gabi1257g00029 439 Gene3D Ribonuclease Inhibitor 72 243 IPR032675 -
Gabi1257g00029 439 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 237 332 - -
Gabi1257g00029 439 MobiDBLite consensus disorder prediction 41 64 - -
Gabi1257g00029 439 Pfam Leucine rich repeat N-terminal domain 75 110 IPR013210 -
Gabi1257g00029 439 SUPERFAMILY L domain-like 75 382 - -
Gabi1257g00029 439 Gene3D Ribonuclease Inhibitor 244 407 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1257g00029 Gabi-Chr1257 292753 294449 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1257g00029 71 396 Leucine-rich Repeat extension Gene Families AT3G24480 41.463 3.38e-71 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1257g00029 - - gmx:100781083 543.502