Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1253g00009 ATGGACAACCTGAGAGCTATCCATCAAGTAGTTCAGACAGAGACCTTTGCCACCTCCGCCGTGGTGGGTGTTTTGTCTTTGCTCTTTTTGCTCTTTCTCAAGCTCAGAGTCAGAGACAAACATTCCAAACTTCCCACAGTACCAGCGGTTCCAGGGCTACCAGTGATAGGGAATCTGTTGCAATTGAAAGAGAGGAAACCTTACAAGACCTTCGTACAGTTAGCCGAGAAATATGGGCCCATTTATTCCATCAAAACCGGTGCTTTCACTGTCATTGTCCTCAACTCCGTGCAGGTTGCTAAGGAGGCAATGGTGACAAGATTTCCGTCCATTTCAACAAGGGCGCTGTCAAATGCACTGAAAGTTCTGACTTATGATAAATGCATGGTTGCTACAAGTGACTACAATGATTTTCACAAAATGGTCAAAAGGCATATTCTTACAAACGTTCTAGGAGCCAATGCACAGAAGCGACACCGTTCCCACAGAGAAACCATGATGGAAAATATTTCAAGGCAGTTTCAAGAACATGTGAAGACCTCCTCTGCTTCGGCTGTTAATTTTAGAAACATATTTGCATCTGAACTTTTTGGACTAGCACTGAAGCAAGGTATGGGAAACAATGTAGAATCTGTTTATGTGGAGGAGCTTATGAGAACTTTGTCAAGAGAGGACATATATAAGATTCTAGTGCTTGACGTGATGGAAGGTGCACTTGAGGTGGATTGGCGAGATTTCTTTCCATACTTGAAATGGATTCCAAATAAGAGTTTTGAGATGAAAATTCAGAAAATGACCTTCCGCAGAAAAGCTGTGATGAAGGCTTTGATGAATGAACAAAAAAAGCAAATGGCTTCAGCAAAGGAAGTAAATTGTTATCTTGAGTACCTGTTATCCGAAGCAAAAGAACTCACAGAAGAACAAGTTTCCATGCTGCTTTGGGAGACCATAATTGAGACATCAGATACTACATTAGTCACAACTGAGTGGGCTATGTATGAACTTGCTAAAGACAAAAGACGCCAGAATCGTCTTTATGAGGAGCTTCAAAATGTTTGTGGATTTGAAAAGCTTACTGAAGACAAATTATCTAAGCTACCATACTTAGGGGCTGTCTTCCATGAAACTTTAAGGAAGCATAGTCCAGCTCCAATGGTCCCACTAAGATATGTACAAGAAGATACCCAACTTGGAGGATATCATATTCCTGCTGGAAGCCAGATTGCAATAAACATATATGGATGTAACATGGACAAGAACCAGTGGGAAAATCCTGAGCAATGGATGCCTGAGAGATTTCTTGATGAGAAATATGACACCATGGATTTGTACAAGACTATGGCGTTTGGAGCAGGAAAGAGGGTGTGTGCAGGGTCTCTTCAGGCAATGTTGATTTCTTGCACAGCAATTGGTAGATTGGTTCAGGAATTTGAGTGGAAGCTCAATGAAGGGGAGGAAGAAGAGAATGTGGATACGGTTGGCCTTACCACCCACAGGCTCCATCCACTGCAAGTGAAACTCAAGCCAAGAAATCAAAGCAATTGA 1545 0.4201 MDNLRAIHQVVQTETFATSAVVGVLSLLFLLFLKLRVRDKHSKLPTVPAVPGLPVIGNLLQLKERKPYKTFVQLAEKYGPIYSIKTGAFTVIVLNSVQVAKEAMVTRFPSISTRALSNALKVLTYDKCMVATSDYNDFHKMVKRHILTNVLGANAQKRHRSHRETMMENISRQFQEHVKTSSASAVNFRNIFASELFGLALKQGMGNNVESVYVEELMRTLSREDIYKILVLDVMEGALEVDWRDFFPYLKWIPNKSFEMKIQKMTFRRKAVMKALMNEQKKQMASAKEVNCYLEYLLSEAKELTEEQVSMLLWETIIETSDTTLVTTEWAMYELAKDKRRQNRLYEELQNVCGFEKLTEDKLSKLPYLGAVFHETLRKHSPAPMVPLRYVQEDTQLGGYHIPAGSQIAINIYGCNMDKNQWENPEQWMPERFLDEKYDTMDLYKTMAFGAGKRVCAGSLQAMLISCTAIGRLVQEFEWKLNEGEEEENVDTVGLTTHRLHPLQVKLKPRNQSN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1253g00009 514 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 10 511 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Gabi1253g00009 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Gabi1253g00009 514 SUPERFAMILY Cytochrome P450 48 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1253g00009 514 Pfam Cytochrome P450 49 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1253g00009 514 CDD CYP77_89 77 504 - -
Gabi1253g00009 514 FunFam Ent-kaurene oxidase 2 39 512 - -
Gabi1253g00009 514 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1253g00009 514 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1253g00009 514 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1253g00009 514 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1253g00009 514 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1253g00009 514 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1253g00009 514 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1253g00009 514 Gene3D Cytochrome P450 38 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1253g00009 514 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1253g00009 514 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1253g00009 514 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1253g00009 Gabi-Chr1253 61953 65561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1253g00009 42 510 Cytochrome P450 AT5G25900 66.383 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1253g00009 K04122 - gmx:100802970 767.689