Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1251g00011 ATGGAGCTTCAGAGGCATATTTGCCTCCTCTTGTTTCTCTTTAGTCTCTTCTCATGCTCCCATGCCTACACATTCTATGTTGGTGGAAAAGATGGATGGGTTTTGAACCCTTTTGAGAATTACAATCAATGGACTCAAAGGAACAGGTTCCAAGTCAGTGACTCTCTTGTTTTCAAGTACAAGAAGGGTTCAGATGCGGTATTGGAGGTGAACAAGGAGGATTATGAAAAATGCAACAAGAAGAACCCGATCAAGAAGTTTGAGGATGGTGACTCAGTGTTCCAGCTTGATCGATCGGGTCCTTTTTACTTCATCAGTGGTAAAGATGGAAATTGTGAAAAGGGTCAGAAACTTATTGTTGTAGTCATGGCTGTGAGAGAACAACAGCATCATAACCCACCTCCATATTCTCCAACACCTCCAACAACACCTTCCCCTATCTATCATCCTCCTTATGTTCCAACACCTCCAAAAACTCCTCCACCTATCAATGAGCCTCCTTATGTCCCAACACCTCCACAGACTCCTTCTCCTCCAGTGTATCATCCTCCTTATGTTCCAACTCCACCAAAAGCTCCTTCACCTGTTAATCAGCCTCCTTATGCTCCAAAACCACCTCAAACTCCTTCCCCTGTATATCATCCTCCCAATGTTCCAACTCCTCCAGTCTATAATCCTCCCAATGTCCCAACTCCTCCAAAAGCTCCATCTCCGGTTAATCATCCTCCCTATGTTCCCACACCTCCACAAAATCCTTCCCCTATTCATAATCCACCCTATTTTCCAACACCTCCAAAAACACCTTCTCCTGTTTATAGTCCACCCAATGTTCCAACCCCTCCAAAAACACCTTCTCCAGTTAACAGTCCACCCAATATTCCTGTTCCTCCGAAAGCTCCTTCTCCTATTAACCATCCACCCTATGTTCCAACACCTCCAAAAACACCTTCTCCAATTTACAGTCCACCCAATGTTCCCACTCCTCCAAAAGCTCCTTCTCCTATTAACCATCCACCCTATGTTCCAACACCTCCAAAAACACCTTCTCCTGTTTACAGTCCACCCAATGTTCCCACTCCTCCAAAATCTCCTTCTCCTATTAACCATCCACCCTATGTTCCAACACCTCCAAACACTCCCTCTCCTGTTTATAGTCCTCCCAATGTTCCTACTCCTCCAAAAGCTCCATCCCCTGGCAATCAGTCTCCCTATGTTCCAACACCTCCAAATACTCCTTCTCCTGTTTATAGTCCTCCCAATGTTCCTGTTCCTCCCAAAGCTCCTTCCCCTATTAATTATCCACCTCATATTCCAACACCTCCAAAAACTCCTTCCCCTGTCAATCAACCACCCTATGCTCCAAAACCTCCAACAACTCCTTCTCCAATTTCTCAGCCTCCCTATGTACCAACACCCCCAAAAACTCCTTCCCCTGTCAACCAACCACCCTACATTCCAACACCTCCAAAAACCCCTTCTCCTATTTCTCAACCTCCCTACATTCCAACTCCAAAAACCCCTTCCCCCATGAATCAACCACCATATGTTGCAGCACCTCCAAATACTCCTACCCCTATCAATCAACCACCCTATGTTTCAACACCTCCAAATACCCATTCTCCAATTTCTCAACCTCCTTACATCATTCCAACACCTCCAAAAACCCCATCCCCCATGAATCAACCACCCTATGTTTCAACACCTCCAAATACCCATTCTCCCATTTCTCAACCTCCTTACATCATTCCAACACCTCCAAAATCCCCTTCCCCCATGAATCAACCTCCATATATTGCAACACCTCCAAACACTCATTCTCCAATTTCTCAACCACCCTCTTACATTCCAAACCCTCCAAAATCCAATTCCCCTATCTCTCAATCCCCATTACCTCAAACACCAATTTCACCATCTCCATTCACACCAGCATCATCACCATATCCATCAAGGTCCCTCCCGCCATCTCAACCACCTTCAGTTTCAACTGCACCAACCTACGCACCTTCGCTCCTCCCTCCGGCGAGTTCTCCTGTGCCGGCCACAGTATCACCACCATCGCTTTCCCCATCGACCACCGCTCCAGCCGCGTCTCCGGGAGCAGCAACTCTATCGCCGTCAGGATCGCCCCAAACGACATCGTCTAGTCCCGCCCCTTCCATAACGCCGTCGTCGTCTAACGAAACGACACCAGCCGGGTCAAACGGCGGCATTGTGTCGTCGTCTGCATGGGCTTCAACTACTTCAGGGTTATGGGCGTATTCTATTACCATTTTAGTTGGTGCTGCTCTAAGCACTATTCTTGGGTAG 2307 0.4716 MELQRHICLLLFLFSLFSCSHAYTFYVGGKDGWVLNPFENYNQWTQRNRFQVSDSLVFKYKKGSDAVLEVNKEDYEKCNKKNPIKKFEDGDSVFQLDRSGPFYFISGKDGNCEKGQKLIVVVMAVREQQHHNPPPYSPTPPTTPSPIYHPPYVPTPPKTPPPINEPPYVPTPPQTPSPPVYHPPYVPTPPKAPSPVNQPPYAPKPPQTPSPVYHPPNVPTPPVYNPPNVPTPPKAPSPVNHPPYVPTPPQNPSPIHNPPYFPTPPKTPSPVYSPPNVPTPPKTPSPVNSPPNIPVPPKAPSPINHPPYVPTPPKTPSPIYSPPNVPTPPKAPSPINHPPYVPTPPKTPSPVYSPPNVPTPPKSPSPINHPPYVPTPPNTPSPVYSPPNVPTPPKAPSPGNQSPYVPTPPNTPSPVYSPPNVPVPPKAPSPINYPPHIPTPPKTPSPVNQPPYAPKPPTTPSPISQPPYVPTPPKTPSPVNQPPYIPTPPKTPSPISQPPYIPTPKTPSPMNQPPYVAAPPNTPTPINQPPYVSTPPNTHSPISQPPYIIPTPPKTPSPMNQPPYVSTPPNTHSPISQPPYIIPTPPKSPSPMNQPPYIATPPNTHSPISQPPSYIPNPPKSNSPISQSPLPQTPISPSPFTPASSPYPSRSLPPSQPPSVSTAPTYAPSLLPPASSPVPATVSPPSLSPSTTAPAASPGAATLSPSGSPQTTSSSPAPSITPSSSNETTPAGSNGGIVSSSAWASTTSGLWAYSITILVGAALSTILG 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1251g00011 768 PANTHER BLUE COPPER PROTEIN 22 170 IPR039391 GO:0009055
Gabi1251g00011 768 CDD OsENODL1_like 23 123 IPR041846 -
Gabi1251g00011 768 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gabi1251g00011 768 MobiDBLite consensus disorder prediction 130 738 - -
Gabi1251g00011 768 MobiDBLite consensus disorder prediction 685 738 - -
Gabi1251g00011 768 MobiDBLite consensus disorder prediction 670 684 - -
Gabi1251g00011 768 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Gabi1251g00011 768 FunFam Early nodulin-like protein 1 22 127 - -
Gabi1251g00011 768 SUPERFAMILY Cupredoxins 21 123 IPR008972 -
Gabi1251g00011 768 Gene3D - 21 127 IPR008972 -
Gabi1251g00011 768 MobiDBLite consensus disorder prediction 133 661 - -
Gabi1251g00011 768 Pfam Plastocyanin-like domain 36 116 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1251g00011 Gabi-Chr1251 135737 138451 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1251g00011 3 186 Phytocyanin Superfamily AT5G53870 47.668 2.91e-56 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1251g00011 - - gmx:100811987 370.548