Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1251g00002 ATGGTGGGCTCAGGAGTATCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAACCGTTTGTCTCAACACAGACTGGACTTACTCTGTCTTCTGGACTATTCGTCCTCGCCCAAGAGTCAGAGGTGGTAATGGCTGCAAGGTTGGGGATGATAGCGGTAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGGTTTAGGTTGTCTTGAAGATATTGATGGAGAGGATCCTGTGAGAAAAGCCTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTCTTTAAAGAGCCCACTGAATGTGAAACCAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGACCGATCAGTTTGAGTCAGGCATTCAGACCATAGCTGTAATTCAAGCTGGGCATGGCCTTCTGCAGCTTGGTTCTTGCAAGATTATTCCTGAAGACCTCCATTTTGTGCTAAGAATGAGACACACTTTTGAATCTCTAGGCTACCAATCTGGTTTCTACCTCTCTCAACTCTTCTCTTCAACAAGGAACACTTCCTCTTCAACTTCTCTTCCTTCAAAACCATCCACCATTCCAATTAGGCCACCTCCTCCACTCTTCAACTGGGGTCAGAGGCCACTTACTTCTGCTAGTTCCATGCTATCCTCACCCACTTTTCAACAACATGCAGCTAGGCTTGGGTTTTCACACACCAAAGATGAGACACACATGTTTCTCATGCCTCATGCATCATCTGAAACTGCAAGAATTGAAGACATGATGGGGGAGCATGAAAATGATATAAAATGGCCAAATGGATTGTCTTTCTGCAATGCTCTCACTGGAAGAACCGATGATGCTAAGCTTTTGTTCAATCCTGAGAATGCATCAAACTTGCAAAATGCTAGTGGACCCAACCCAAATGAGTTTTTGAGCTTGGATTCTCACCCAGAAGGTGCAAGGAAAATGGACAAGTTTAAGAGGAGCTTCACTCTGCCTACAAGGGTGGCTTCATCATCTTCATCCACTTCAATGGATCACCATCATCAACAACAAGGTGTGGAGTACAGGAATTCAGAAGGGGGTATGTACCCGGATGTCATGGAAACCTTTTTAGAGTGA 1194 0.4531 MVGSGVSSDRSKEAVGMMALHEALRTVCLNTDWTYSVFWTIRPRPRVRGGNGCKVGDDSGSLMLMWEDGFCRGRGLGCLEDIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECETNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSTIPIRPPPPLFNWGQRPLTSASSMLSSPTFQQHAARLGFSHTKDETHMFLMPHASSETARIEDMMGEHENDIKWPNGLSFCNALTGRTDDAKLLFNPENASNLQNASGPNPNEFLSLDSHPEGARKMDKFKRSFTLPTRVASSSSSTSMDHHHQQQGVEYRNSEGGMYPDVMETFLE 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1251g00002 397 MobiDBLite consensus disorder prediction 356 373 - -
Gabi1251g00002 397 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 188 IPR025610 -
Gabi1251g00002 397 PANTHER GB|AAF34833.1 1 397 IPR044170 -
Gabi1251g00002 397 MobiDBLite consensus disorder prediction 320 334 - -
Gabi1251g00002 397 MobiDBLite consensus disorder prediction 320 340 - -
Gabi1251g00002 397 MobiDBLite consensus disorder prediction 356 386 - -
Gabi1251g00002 397 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1251g00002 Gabi-Chr1251 24774 26972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1251g00002 21 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.673 1.11e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1251g00002 - - gmx:100814723 693.345