Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1251g00001 ATGGTGGGCTCAGGAGTATCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAACCGTTTGTCTCAACACAGACTGGACTTACTCTGTCTTCTGGACTATTCGTCCTCGCCCAAGAGTCAGAGGTGGTAATGGCTGCAAGGTTGGGGATGATAGCGGTAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGGTTTAGGTTGTCTTGAAGATATTGATGGAGAGGATCCTGTGAGAAAAGCCTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTCTTTAAAGAGCCCACTGAATGTGAAACCAATATCTCCAACTACTGGCAGAGCTCCTTTGATGCTCTTCCTCCTGAATGGACCGATCAGTTTGAGTCAGGCATTCAGACCATAGCTGTAATTCAAGCTGGGCATGGCCTTCTGCAGCTTGGTTCTTGCAAGATTATTCCTGAAGACCTCCATTTTGTGCTAAGAATGAGACACACTTTTGAATCTCTAGGCTACCAATCTGGTTTCTACCTCTCTCAACTCTTCTCTTCAACAAGGAACACTTCCTCTTCAACTTCTCTTCCTTCAAAACCATCCACCATTCCAATTAGGCCACCTCCTCCACTCTTCAACTGGGGTCAGAGGCCACTTACTTCTGCTAGTTCCATGCTATCCTCACCCACTTTTCAACAACATGCAGCTAGGCTTGGGTTTTCACACACCAAAGATGAGACACACATGTTTCTCATGCCTCATGCATCATCTGAAACTGCAAGAATTGAAGACATGATGGGGGAGCATGAAAATGATATAAAATGGCCAAATGGATTGTCTTTCTGCAATGCTCTCACTGGAAGAACCGATGATGCTAAGCTTTTGTTCAATCCTGAGAGCTTGGGAAGCAAACCAGGTGATCAGAATCACCACCACCACCCACACTCTCTTAACCAAAATCACAATTCAGATGCATCAAACTTGCAAAATGCTAGTGGACCCAACCCAAATGAGTTTTTGAGCTTGGATTCTCACCCAGAAGGTGCAAGGAAAATGGACAAGTTTAAGAGGAGCTTCACTCTGCCTACAAGGGTGGCTTCATCATCTTCATCCACTTCAATGGATCACCATCATCAACAACAAGGTGTGGAGTACAGGAATTCAGAAGGGGGTATGTACCCGGATGTCATGGAAACCTTTTTAGAGTGA 1266 0.4542 MVGSGVSSDRSKEAVGMMALHEALRTVCLNTDWTYSVFWTIRPRPRVRGGNGCKVGDDSGSLMLMWEDGFCRGRGLGCLEDIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECETNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSTIPIRPPPPLFNWGQRPLTSASSMLSSPTFQQHAARLGFSHTKDETHMFLMPHASSETARIEDMMGEHENDIKWPNGLSFCNALTGRTDDAKLLFNPESLGSKPGDQNHHHHPHSLNQNHNSDASNLQNASGPNPNEFLSLDSHPEGARKMDKFKRSFTLPTRVASSSSSTSMDHHHQQQGVEYRNSEGGMYPDVMETFLE 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1251g00001 421 MobiDBLite consensus disorder prediction 380 397 - -
Gabi1251g00001 421 PANTHER GB|AAF34833.1 1 421 IPR044170 -
Gabi1251g00001 421 MobiDBLite consensus disorder prediction 338 358 - -
Gabi1251g00001 421 MobiDBLite consensus disorder prediction 315 364 - -
Gabi1251g00001 421 MobiDBLite consensus disorder prediction 380 410 - -
Gabi1251g00001 421 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 188 IPR025610 -
Gabi1251g00001 421 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1251g00001 Gabi-Chr1251 24774 26972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1251g00001 21 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.673 3.26e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1251g00001 - - gmx:100814723 732.25