Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1245g00003 ATGTTTTTGTTCATGAATCCGTGTGCCAAGCCAACCCCCGTTGATGGGGATGAAGATGACCGTGGGAACGGCACGCCGAACACAAAAGAAGCCGTCAAGGGTCTGACGTCGCAGATTAAGGATCTGGCGCTGAAGCTTTCAGGGAAGAAAATCAAAGCTGGCAACCCCAAGAGCATCAAGTATGACACCGTTTCTGAAGAGGTTCCATACGGCTACATTGGTGGTGGAAGCGCAAGTTCAACCCCTGCTTTGGACTACACAAACCCCAATCAATCCCCAATTGGTAACACCACCCCTGGAGGGCGTCAACCTCAACCACCAGCTGGTAGTGTAGCGATGGTGGACATGACTGGATCCAACAAGTGGATAGCAAAGATGGAGCCAGGTGCTCACATCACCGTTGTGTCTCTTCCTACTGGGGGCAATGATCTCAAAAGGATTCGCTTCTGGGAGCTTCATAATATCCAGACTTTAAATCAACATGTTTCCAACACTCCTGCAAGGTCTGATGATGATGAGAACTCGGGGGAATCTGAACAAGATATCCCAATGGCTTCAATGCTGAACATGGATTCGACTCCGGGGAATTTCCATGCACCCGCTGGGAATATGGGGTATTTCCATGGTGGGATATCAAGGGCTAACGACCCTACTGATAATGACATGGATGCTGAATGGGTTGAGCAAGATGATCCTGGAGTGTCAATCACTGTGAAGAGGTCAGCTAATGGGACCAGGCAAATTCGCCGTATCAAATTCAGCCGGGAAATTTTTGATGCAGATGCAGCCAAGGATTGGTGGCTGCGCAACAGGGTTCGAGTTCATGCTCAGTATATGTGA 840 0.4929 MFLFMNPCAKPTPVDGDEDDRGNGTPNTKEAVKGLTSQIKDLALKLSGKKIKAGNPKSIKYDTVSEEVPYGYIGGGSASSTPALDYTNPNQSPIGNTTPGGRQPQPPAGSVAMVDMTGSNKWIAKMEPGAHITVVSLPTGGNDLKRIRFWELHNIQTLNQHVSNTPARSDDDENSGESEQDIPMASMLNMDSTPGNFHAPAGNMGYFHGGISRANDPTDNDMDAEWVEQDDPGVSITVKRSANGTRQIRRIKFSREIFDADAAKDWWLRNRVRVHAQYM 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1245g00003 279 ProSiteProfiles BRX domain profile. 224 279 IPR013591 -
Gabi1245g00003 279 PANTHER PROTEIN BREVIS RADIX-LIKE 1 16 278 IPR044532 -
Gabi1245g00003 279 Pfam Transcription factor regulating root and shoot growth via Pin3 224 278 IPR013591 -
Gabi1245g00003 279 Pfam Transcription factor regulating root and shoot growth via Pin3 120 149 IPR013591 -
Gabi1245g00003 279 MobiDBLite consensus disorder prediction 1 33 - -
Gabi1245g00003 279 Pfam Transcription factor BRX N-terminal domain 25 48 IPR027988 -
Gabi1245g00003 279 MobiDBLite consensus disorder prediction 88 104 - -
Gabi1245g00003 279 MobiDBLite consensus disorder prediction 88 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1245g00003 Gabi-Chr1245 17917 19855 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1245g00003 5 279 Major Intrinsic Protein MIP AT1G31880 39.130 4.54e-64 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1245g00003 - - jre:109004022 223.402