Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1245g00002 ATGGTATGTATTAATTGTATGATTAAGGATCTGGCGCTGAAGCTTTCAGGGAAGAAAATCAAAGGTGGCACCTCCGAGAGCATCAACGCAAGTTCAACCCCTGCTTTGGACTACACAAACCCCAATCAATCCCCAATTGGTAACACCACCCCTGGAGGGCGTCAACCTCAACCACCAGCTGGTAGTGTAGCGTTGGTGGACATGACTGGATCCAACGAGTGGATAGCACAGATGGAGCCAGGTGTTCACATCACCGTTGTGTCTCTTCCTACTGGGGGCAATGATCTCAAAAGGATTCACTTCTGCCGAGACATGTTTGATAAGTCGCGAGCCCAGAGGTGGTGGGCTGAGAATTGCGACATGATCAGGGAGCTTCTTAATATACAGACTTTAAATCAACGTGTTTTCATCACTCCTGCAAGGTCTGATGATAATGAGAACTCGGGGGAATCTGAACAAGATATCCCAATGGCTTCAATGCTGAACATGGATTCGACTCGGGGGAATTTCCATGCACCCGCTGGGAATATGGGGTATTTCCATGGTGGGATATCAAGGGCTAACAACCCTACTGACAATGACATGGATGCTGAATGGGTTGAGCAGGATGATCCTGGAGTGTCAATCACTGTGAAGAGGTCAGCTAATGGGACCAGGCAAATTTGCCGTATCAAATTCAGCCGGGAAATTTTTGATGCAGATGCAGCCAAGGATTGGTGGCTGCGCAACAGGTTCGAGATCATGCTCAGTATATGTGAAGCCTTGTTGCTGTGA 774 0.4806 MVCINCMIKDLALKLSGKKIKGGTSESINASSTPALDYTNPNQSPIGNTTPGGRQPQPPAGSVALVDMTGSNEWIAQMEPGVHITVVSLPTGGNDLKRIHFCRDMFDKSRAQRWWAENCDMIRELLNIQTLNQRVFITPARSDDNENSGESEQDIPMASMLNMDSTRGNFHAPAGNMGYFHGGISRANNPTDNDMDAEWVEQDDPGVSITVKRSANGTRQICRIKFSREIFDADAAKDWWLRNRFEIMLSICEALLL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1245g00002 257 MobiDBLite consensus disorder prediction 22 56 - -
Gabi1245g00002 257 ProSiteProfiles BRX domain profile. 72 127 IPR013591 -
Gabi1245g00002 257 ProSiteProfiles BRX domain profile. 197 252 IPR013591 -
Gabi1245g00002 257 MobiDBLite consensus disorder prediction 21 61 - -
Gabi1245g00002 257 PANTHER PROTEIN BREVIS RADIX-LIKE 1 28 247 IPR044532 -
Gabi1245g00002 257 Pfam Transcription factor regulating root and shoot growth via Pin3 72 123 IPR013591 -
Gabi1245g00002 257 Pfam Transcription factor regulating root and shoot growth via Pin3 197 248 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1245g00002 Gabi-Chr1245 10546 11981 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1245g00002 4 248 Major Intrinsic Protein MIP AT1G31880 37.582 1.48e-56 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1245g00002 - - ini:109153227 189.504