Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1239g00012 ATGCCTTCAACTGCTTTTCAATGGCTAAGCCTTATAGGTAGCATTTGGCTACAAGCCATAAATGGAACAAACACCAATTTCCCTGCTTACTCCTCTCAGCTGAAGCAACTCCTTTCCATGTCCCAAGTGCAGCTCAATAACCTTGCTTTTGCTTCTGATGCAGGCAAACTTTTTGGCTGTTTTTCAGGCATGGCAGCTGTTTACCTCCCCCTTTGGCTTGTCCTCATGATAGGTTCAACTCTGGGGTTAATTGGTTATGGAGTGCAATATCTCTTCATAACAAACCAAATTTCCTCTTTGTCCTATTGGCATGTTTTCTTTCTAACTGTTCTAGCAGGGAATAGTATTTGTTGGATTAACACTGTCTGCTATGTTGTCACAATAAGGAACTTCTCATCTGATCGCCAAGTTGCTGTGGGATTAACAACTAGTTACCAAGGATTAAGTGCAAAGATTTACACCAGCATTGTTGATGCTGTTTCTGAACACAAAAAAGCTAGAACCTTTCTCTTTTTAAACTCAATCTTACCTGTGATAGTTGGCCTAATAGCAGCTCCTTTAGTCAGAGAAATAGAAGTCTCAAGGCCTAAACATATGGGTGTAGGATTTGTTGTTATGTTTGTTATTACAATTGCCACTGGAATATATGCTGTGATGACCAGCTTGCAATTTGTATCTAACAAAATATCTCCACTGGGTAACCTTGTTGGTATTATAGTGTCCCTTTTCCTCCCTCTGCTAGTTTCAGTTTCTGTGAAGATCAGTGAACTAGTGGGGTCGTGGCAGACAAATAGAGAAAGACTGAGAGTCTACCATTTTACAGTAGAGGAGAGCACTGATAAAGAGAGAACAGAGAATGAGATGAAAGAGGGTGAAGATAGCAGAGAAGTTCAAGAGGTTGGCATTAGAGAAGAAATAGGAGTGATGTTGATGCTGCAAAGAATAGATTTCTGGTTATATTTCTTTGTGTATTTATTTGGTGCCACACTGGGTTTAGTATTTCTTAATAACTTGGGACAAATAGCTGAATCCAGGGGTTACTCCGATACTTCATCGTTGGTGTCTTTGTCTTCCTCTTTTGGGTTCTTTGGACGTCTCATGCCATCTATTATGGACTACTTTTACCGGGGAAAGTGTAAAATATCAAGACCAGCTTCTATGGTGGCATTGATGGCTCCAACAGCAGGCGCATTCTTCTTACTTCTCAATAAAACTCACGTTGCACTCTATATTAGCACTGCAATAATTGGAGTTTGTACTGGAGCAATCACTTCAATTTCTGTTTCCACCACCACCGAACTATTTGGACCCAAGAATTTCTCCGTGAACCATAATGTGGTGGTGGCCAACATTCCAATAGGCTCCTTTCTGTTTGGCTACTTGGCTGCCCTTATTTACCGTAAGGAAGGTCATGGACATGGGAAATGCATGGGCATGGAATGCTACAAAAACACTTTCATCATCTGGGGTTCCCTTTGTTTCTTTGGCACTTTCTTGGCTTTGATTCTACATGCTAGGACTCGCAAGTTTTACTCACAAAAACAGTAG 1548 0.4089 MPSTAFQWLSLIGSIWLQAINGTNTNFPAYSSQLKQLLSMSQVQLNNLAFASDAGKLFGCFSGMAAVYLPLWLVLMIGSTLGLIGYGVQYLFITNQISSLSYWHVFFLTVLAGNSICWINTVCYVVTIRNFSSDRQVAVGLTTSYQGLSAKIYTSIVDAVSEHKKARTFLFLNSILPVIVGLIAAPLVREIEVSRPKHMGVGFVVMFVITIATGIYAVMTSLQFVSNKISPLGNLVGIIVSLFLPLLVSVSVKISELVGSWQTNRERLRVYHFTVEESTDKERTENEMKEGEDSREVQEVGIREEIGVMLMLQRIDFWLYFFVYLFGATLGLVFLNNLGQIAESRGYSDTSSLVSLSSSFGFFGRLMPSIMDYFYRGKCKISRPASMVALMAPTAGAFFLLLNKTHVALYISTAIIGVCTGAITSISVSTTTELFGPKNFSVNHNVVVANIPIGSFLFGYLAALIYRKEGHGHGKCMGMECYKNTFIIWGSLCFFGTFLALILHARTRKFYSQKQ 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1239g00012 515 CDD MFS_Mch1p_like 7 497 - -
Gabi1239g00012 515 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 512 - -
Gabi1239g00012 515 Gene3D MFS general substrate transporter like domains 268 509 IPR036259 -
Gabi1239g00012 515 Pfam Nodulin-like 7 249 IPR010658 -
Gabi1239g00012 515 SUPERFAMILY MFS general substrate transporter 4 509 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1239g00012 Gabi-Chr1239 117471 119688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1239g00012 1 514 Nodulin-like Gene Family AT2G30300 49.240 1.13e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1239g00012 - - gmx:100808034 832.017