Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1239g00011 ATGCCTTCAACTGCTTTTCAATGGCTAAGCCTTATAGGTAGCATTTGGCTACAAGCCATAAATGGAACAAACACCAATTTCCCTGCTTACTCCTCTCAGCTGAAGCAACTCCTTTCCATGTCCCAAGTGCAGCTCAATAACCTTGCTTTTGCTTCTGATGCAGGCAAACTTTTTGGCTGTTTTTCAGGCATGGCAGCTGTTTACCTCCCCCTTTGGCTTGTCCTCATGATAGGTTCAACTCTGGGGTTAATTGGTTATGGAGTGCAATATCTCTTCATAACAAACCAAATTTCCTCTTTGTCCTATTGGCATGTTTTCTTTCTAACTGTTCTAGCAGGGAATAGTATTTGTTGGATTAACACTGTCTGCTATGTTGTCACAATAAGGAACTTCTCATCTGATCGCCAAGTTGCTGTGGGATTAACAACTAGTTACCAAGGATTAAGTGCAAAGATTTACACCAGCATTGTTGATGCTGTTTCTGAACACAAAAAAGCTAGAACCTTTCTCTTTTTAAACTCAATCTTACCTGTGATAGTTGGCCTAATAGCAGCTCCTTTAGTCAGAGAAATAGAAGTCTCAAGGCCTAAACATATGGGTGTAGGATTTGTTGTTATGTTTGTTATTACAATTGCCACTGGAATATATGCTGTGATGACCAGCTTGCAATTTGTATCTAACAAAATATCTCCACTGGGTAACCTTGTTGGTATTATAGTGTCCCTTTTCCTCCCTCTGCTAGTTTCAGTTTCTGTGAAGATCAAGAATGAGATGAAAGAGGGTGAAGATAGCAGAGAAGTTCAAGAGGTTGGCATTAGAGAAGAAATAGGAGTGATGTTGATGCTGCAAAGAATAGATTTCTGGTTATATTTCTTTGTGTATTTATTTGGTGCCACACTGGGTTTAGTATTTCTTAATAACTTGGGACAAATAGCTGAATCCAGGGGTTACTCCGATACTTCATCGTTGGTGTCTTTGTCTTCCTCTTTTGGGTTCTTTGGACGTCTCATGCCATCTATTATGGACTACTTTTACCGGGGAAAGTGTAAAATATCAAGACCAGCTTCTATGGTGGCATTGATGGCTCCAACAGCAGGCGCATTCTTCTTACTTCTCAATAAAACTCACGTTGCACTCTATATTAGCACTGCAATAATTGGAGTTTGTACTGGAGCAATCACTTCAATTTCTGTTTCCACCACCACCGAACTATTTGGACCCAAGAATTTCTCCGTGAACCATAATGTGGTGGTGGCCAACATTCCAATAGGCTCCTTTCTGTTTGGCTACTTGGCTGCCCTTATTTACCGTAAGGAAGGTCATGGACATGGGAAATGCATGGGCATGGAATGCTACAAAAACACTTTCATCATCTGGGGTTCCCTTTGTTTCTTTGGCACTTTCTTGGCTTTGATTCTACATGCTAGGACTCGCAAGTTTTACTCACAAAAACAGTAG 1458 0.4067 MPSTAFQWLSLIGSIWLQAINGTNTNFPAYSSQLKQLLSMSQVQLNNLAFASDAGKLFGCFSGMAAVYLPLWLVLMIGSTLGLIGYGVQYLFITNQISSLSYWHVFFLTVLAGNSICWINTVCYVVTIRNFSSDRQVAVGLTTSYQGLSAKIYTSIVDAVSEHKKARTFLFLNSILPVIVGLIAAPLVREIEVSRPKHMGVGFVVMFVITIATGIYAVMTSLQFVSNKISPLGNLVGIIVSLFLPLLVSVSVKIKNEMKEGEDSREVQEVGIREEIGVMLMLQRIDFWLYFFVYLFGATLGLVFLNNLGQIAESRGYSDTSSLVSLSSSFGFFGRLMPSIMDYFYRGKCKISRPASMVALMAPTAGAFFLLLNKTHVALYISTAIIGVCTGAITSISVSTTTELFGPKNFSVNHNVVVANIPIGSFLFGYLAALIYRKEGHGHGKCMGMECYKNTFIIWGSLCFFGTFLALILHARTRKFYSQKQ 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1239g00011 485 CDD MFS_Mch1p_like 7 467 - -
Gabi1239g00011 485 Gene3D MFS general substrate transporter like domains 7 479 IPR036259 -
Gabi1239g00011 485 Pfam Nodulin-like 7 249 IPR010658 -
Gabi1239g00011 485 SUPERFAMILY MFS general substrate transporter 4 479 IPR036259 -
Gabi1239g00011 485 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1239g00011 Gabi-Chr1239 117471 119688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1239g00011 1 484 Nodulin-like Gene Family AT2G30300 48.177 1.39e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1239g00011 - - gmx:100808034 779.245