Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1239g00005 ATGATTGCTCTCTGTATCGCTGCAGTAGCAATTCTTACTCACTTGAGAGAGAGCTCGATGCATGTGGCTGTTCAAATCCGGGGATGGCTGGTATGGAGATTTGTGGGGCTTGCTTCAACTGTTGTTGGATTGCTCTGTTATGCTCTCAGCTCAGCCTTCAACCATTTATTCGGAAAGTGGTACTCATGGAAGATCTTTCTTTATATTGTTGTCAGTGTCTTCATCTGTCTCTTGATTTTGTTTCCAGAGATATGGCAACGCTTGTTGATCAGTCCCCGGTTCAAAACTCATTCACCATTTTGGGTTGTTTCCATCACATCTGTGTATTCCTTTTTCTTTGACAAAGCCGTATCTGGAAAATCAGATGTATATAACCTGATTTCGTGTGCTGCCTTTGCCATCGTGTCCCTCAGTTTGTCAAGACGAACTCATTGTGGATTTGAAAAGGATCTTTTATATTTTTTTCTGGGAGTTCTAATAGTACGACTCATGATGATTAAAATAGCTTTAGGTATTCTTGGAGTATGTTTCGGCTATTTCCTTCATTATCTTTGTTACTCAGATGCTCCTCCACGAGAGTATGTTGGACTCCAATCCGTAGTCATTGAATTAGCTGATGATTCCCCACAGCCACAAGCGGCAAGTACTGATATTAATGCTAGTATGGCTCATCAACTGAGGACTTATATGAAGGAGCTTACACAGGTATATTTGAATGCCACCTACACGCTTTTCCCATATTTTGAAGAGTACGATGAACTGGAAGTGACGGAACGCAACTACGTGATGGAAGCGTTGCCCTCGAGTTTGATCAATGATCTTGAAAAGACTGTGAAGGCAATGATGGCCGCTGGGTTTAAGAAGGAGTGCTACGATGTGTACATCAAAAGTCGGAGGAAATGCTTGGTGGATTGTGTAATAAATTATTTCTTGTTTCGAGCTGTCAACAACGATAAGGATATAGCTGCAGGGTTTGGAATCGATGTTCTCGTGATTAGAAGATTGGCTGAAGCTTTGAAGGTGACTCTGGGGATACTATTTTACGGGGAGCAGAGACTTTTCGATGGTGTCTTCTCGGGATTCTCTGATGCATCTTATCCTTGTTTCCTACAGATTTGCGAAGGACTCACCCTTCAGCTCTTGGATCTTATTGATGCAGTTGTGAGTGCGAGACGCTCCGGTAGACATTGGCGTCCCTTGTTGTACGCCATCCTTTACTTGTTTAATACATTGGGTGATTTGATTCCGGAATTTCAATTATATTTTCCTGAGTCATTGGTAAATAAAGCAATCGAAATGCAGAACAGATTGGAAGAAGCAAGCAGAGATATTTTCATGGACTTGGGGAATAATCTGATTTCTCGTAGCCCAACTCTATTCAATGTCTCGCATCATCCAATGACCACAGAAGCCATGGACTGCATCGTTCAAGGATCACGGGAGATCCAGAACCAAATTTTTGAACACTACCTCAAGGTTAGTAATAAATTGGAAAAATCTTCATCATTTTATGATTTACAGAAAATCAAATCTTCCTGTGCTATACCAATGGCGTGGATGTTACGACAATTACAGACAGAGTCCAAAAACATTGAGGATCCTGCTTGGCAGAATTTCCTCATGTTGTCAAGTTGGTTTAATGTAGAATGCATATCAATAGAAAAGGGACTCAAAACCTTGTTGGGTGAAGCAGACGCAAAAGTCGTAAAATACCTCGAACTCTATGTAAGAAACTCATGGGAAAAGGGACTCGAATTTTTGAACTTAGAGAGCTACAATTCCATGGACCCCAATATTGCATCAGAGTCCATGATAAACAAGCTCACATTGTTTAACAAGCACTTTCGGGACACATGCACTATTCAGTCTTCATGGTCTGCCTCTTATAGGGAACTCGGGGAACAAATGGTAATATCCATTGAAAACATCTTGTTACCGGCATATGGAAAATTCATTGACAGGTTCCACCATATTATCGGTAAGCGTTCTTACGAAGAATATATTAAGTATGGAATAGATGACATTCAAGATCGACTCCATGATTTATTTCGTGGAATCAAAGCTTAG 2067 0.4083 MIALCIAAVAILTHLRESSMHVAVQIRGWLVWRFVGLASTVVGLLCYALSSAFNHLFGKWYSWKIFLYIVVSVFICLLILFPEIWQRLLISPRFKTHSPFWVVSITSVYSFFFDKAVSGKSDVYNLISCAAFAIVSLSLSRRTHCGFEKDLLYFFLGVLIVRLMMIKIALGILGVCFGYFLHYLCYSDAPPREYVGLQSVVIELADDSPQPQAASTDINASMAHQLRTYMKELTQVYLNATYTLFPYFEEYDELEVTERNYVMEALPSSLINDLEKTVKAMMAAGFKKECYDVYIKSRRKCLVDCVINYFLFRAVNNDKDIAAGFGIDVLVIRRLAEALKVTLGILFYGEQRLFDGVFSGFSDASYPCFLQICEGLTLQLLDLIDAVVSARRSGRHWRPLLYAILYLFNTLGDLIPEFQLYFPESLVNKAIEMQNRLEEASRDIFMDLGNNLISRSPTLFNVSHHPMTTEAMDCIVQGSREIQNQIFEHYLKVSNKLEKSSSFYDLQKIKSSCAIPMAWMLRQLQTESKNIEDPAWQNFLMLSSWFNVECISIEKGLKTLLGEADAKVVKYLELYVRNSWEKGLEFLNLESYNSMDPNIASESMINKLTLFNKHFRDTCTIQSSWSASYRELGEQMVISIENILLPAYGKFIDRFHHIIGKRSYEEYIKYGIDDIQDRLHDLFRGIKA 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1239g00005 688 Pfam Exo70 exocyst complex subunit 337 680 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi1239g00005 688 SUPERFAMILY Cullin repeat-like 246 683 IPR016159 -
Gabi1239g00005 688 Gene3D Exocyst complex component Exo70 197 688 - -
Gabi1239g00005 688 PANTHER EXOCYST COMPLEX PROTEIN EXO70 257 685 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1239g00005 Gabi-Chr1239 40772 43077 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1239g00005 256 685 EXO70 exocyst subunit family AT5G58430 33.778 2.42e-56 201