Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1239g00004 ATGATGGCTCTCTGTATCCCTGTAGTGGCAATTCTTACTCACTTGAGAGAGAGCATGATGCTCGTGGCTGTTCAAATCCGGGTATGGCTGAAGCAGCCAGAGGTATGGAGATTTGTGGGACTTGCTTCAACTGTTGTCGGATTGATCTGTTTTGCTCTCAGCTCAGTCTTCAACCATTTATTCGGAAAGTGGTACTCATGGAAGTTATCTCTTTATATTGTTGTCAGTGTCTTCATCTGTCTCTTGATTTTGTTTCCAGAGATATGGCAACGCTTCTTGATCAGTCCCCGGTTCAAAACTCATTCACCATTTTGGGTTGCTTCCATCACCTCTGTGTATTCCTTTTTCTTTGACAAAGCCGTATCTGGGAAACCCGACGTATATAACCTGATTTCGTGTGCTTCCTTTGCCATCATGTCACTCAGTTTGTCAAGACGAACTCATTGTGGATTGGAAAAGGATCTTTTATATTTTTTTCTGGGAGTTCTAATAGTACGACTCATGATGATTAAAACAGCTTTAGGTGTTGTTGGAGTATGTTTTGGCTATTTCCTTCATTCTCTTTGTTCCTCAGGTGCTACTGCTACTCCACCACAATATGTTGAACTCCAAGGTGAACCTTCTCCACAACTCCACTCCGTAGTCATTGAAGCTGATGATTCCCCACAAGCGGCAAGTACTGATATTGCTGGTATGGCTAATCAACTCAGGACTTGTATGAAGAAGCTTAAACAGAAATATCTGAATGTCACCTACACGCTTTTCCCACATCTCGAACATAACTATCAACTGTCAGTGACGGACCACAACTACGTGATCGATGCGCTTCCCTCGAGATTGATCAATGATCTTCATGAGACTGTGAAGGTGATGATGGAAGCTGGGTTTGAGAAGGAGTGCTACGATGTGTACACCAAAAGACGGAAGGAATGCTTGGAGGATTGTCTAATAAATAAACTATTGTTCGGAGAAGAGATCAACATCGAGAAGGAGAAACGTACAGAGATTGAATTCGAAGATTTCATGATTAGAAGATTGGGTAAAGCTTGCAAGGTGGCTCTCAGGATACTATTCCCTGGTGAGCAGCGACTATGTGATCGTGTCTTCTTAGGTTTCTCTGATTCTGCTTATCTTTGTTTCATAGATGTTTGTCAAGGAGCCACCATTAAGTTGTTGGATTTTGTTGACGCGGTTGCTAGTGGGAGCCCCTCAGCTTGGCGTTTGTTCAAAATCATAGACATGTTTGAGACATTGCGTGATTTGATTCCGGAATTCCAATCATTGTTTCCTGAGTCAATGGTAAATGAAGCAATCAAAATACAGAACAGATTGGGAGAAGCAAGCAGAGATATTTTCTTGGACTTGGGGAATCTGATTTCCCGTACTCCGGGAAACTGCTGGCTTCTTCCAATGACCCAAAGTGTCATAAACTGTATCATTGCTGCTCGAGAATCACGGCAGATTCTGGAGCAAATTTTAGAAGAATACCCCAAGGTTGGTAATGAAGTGGGAAAATCTTCATTTTCTGCACAGATGGAATGGATGATAGAGCTATTAGAAAGAAAATTGATAGCAGAGTCCAAAAACTTTGAGGACCCTGCTTCGCACTATTTTTTCATGATGTTAAATTGGAGTTACTTAGAACAGAAGGCAAAAGAAGAGGGATTGGGAACCATGTTGGGTGATGATTGGTTCCCAAGAAATGAAGCGAAAGTCAGAAAATACCTTGAGCTCTATCTAAAAAACTCATGGGAAATGGTACTGGATTTTTTAAAATTAGAGAGCTACGAGTCAGTGGTCCCCAATGTTGTTACATTAGAGTTCATGAAAGAAAAGCTCAATTTGTTCAACAAGCATTTCCGCGAGACATGCAACGTTCAATCTACATGGTTTGTCTTTGATGAGCGACTGAAGGAACAAATAAGAAAATCCATTGAAAACATCTTGCTACCAACATATGGAAAATTCATTGGGAGGTTCGAGGATGTTCTCGGTAAGCATTCCGATGAATATATTAAGTATGGAATAGGTGACATTCAAGATCGACTCCACCATTTATTTCTTGGTAGTAATGGGATGAATCAATAG 2088 0.4109 MMALCIPVVAILTHLRESMMLVAVQIRVWLKQPEVWRFVGLASTVVGLICFALSSVFNHLFGKWYSWKLSLYIVVSVFICLLILFPEIWQRFLISPRFKTHSPFWVASITSVYSFFFDKAVSGKPDVYNLISCASFAIMSLSLSRRTHCGLEKDLLYFFLGVLIVRLMMIKTALGVVGVCFGYFLHSLCSSGATATPPQYVELQGEPSPQLHSVVIEADDSPQAASTDIAGMANQLRTCMKKLKQKYLNVTYTLFPHLEHNYQLSVTDHNYVIDALPSRLINDLHETVKVMMEAGFEKECYDVYTKRRKECLEDCLINKLLFGEEINIEKEKRTEIEFEDFMIRRLGKACKVALRILFPGEQRLCDRVFLGFSDSAYLCFIDVCQGATIKLLDFVDAVASGSPSAWRLFKIIDMFETLRDLIPEFQSLFPESMVNEAIKIQNRLGEASRDIFLDLGNLISRTPGNCWLLPMTQSVINCIIAARESRQILEQILEEYPKVGNEVGKSSFSAQMEWMIELLERKLIAESKNFEDPASHYFFMMLNWSYLEQKAKEEGLGTMLGDDWFPRNEAKVRKYLELYLKNSWEMVLDFLKLESYESVVPNVVTLEFMKEKLNLFNKHFRETCNVQSTWFVFDERLKEQIRKSIENILLPTYGKFIGRFEDVLGKHSDEYIKYGIGDIQDRLHHLFLGSNGMNQ 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1239g00004 695 Pfam Exo70 exocyst complex subunit 348 683 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi1239g00004 695 Gene3D Exocyst complex component Exo70 211 694 - -
Gabi1239g00004 695 SUPERFAMILY Cullin repeat-like 229 687 IPR016159 -
Gabi1239g00004 695 PANTHER EXOCYST COMPLEX PROTEIN EXO70 211 688 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1239g00004 Gabi-Chr1239 31645 34005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1239g00004 266 690 EXO70 exocyst subunit family AT5G58430 47.140 1.42e-113 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1239g00004 - - gmx:100788866 623.624