Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1235g00016 ATGCAATCAGTGAGTCTTGTGTGTCTCTCCAATTCGTTGTTTGGATCTGCCGTCACTGCTGCTCCTTCTTCTTCTTGTCTTAGGTTCCCCCCACTCTTCCGAAGGATCACAAATTCAACAACGTCGTCGTTTCACTTACAAAATTGTCGACCTCTTCGCTCCACTGGTTCTTCTAGTGACTCGGCACAAGTTACAGAAATGGCTTCCAAGGGTGCTCAAGATCAAGACCCACGTATGGCAAGAATCTCATCTGCAATCCGAGTCATCCCCAACTTTCCTAAGCCAGGTATTATGTTTCAAGATATAACCACGCTGCTGCTTGATACAAAGGCTTTCAAAGATACCATTGACTTGTTTGTTGAGAGGTACAGAGATCAAAATATTTCTGTTGTCGCAGGCATTGAAGCGAGAGGCTTTATATTTGGCCCACCCATTGCATTAGCTATTGGAGCAAAATTTGTCCCCATGAGGAAACCCAATAAATTGCCAGGGGAGGTTATCTCAGAAGAGTATTCTTTGGAGTATGGAACTGACAAAATGGAGATGCATGTAGGAGCTGTACAACCTGGAGAACGAGCCTTAATCATAGATGATCTTATTGCCACTGGTGGAACTTTATGTGCAGCAATTAAGCTACTAGAACGTGTTGGGGTGCATGTTGTTGAGTGTGCTTGTGTGATTGAATTACCAGAGTTAAAGGGGCGAGAAAGGCTAGGCAACAAGCCGCTATTTGTCTTAGTTAATGGTGCCTGA 753 0.4422 MQSVSLVCLSNSLFGSAVTAAPSSSCLRFPPLFRRITNSTTSSFHLQNCRPLRSTGSSSDSAQVTEMASKGAQDQDPRMARISSAIRVIPNFPKPGIMFQDITTLLLDTKAFKDTIDLFVERYRDQNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTDKMEMHVGAVQPGERALIIDDLIATGGTLCAAIKLLERVGVHVVECACVIELPELKGRERLGNKPLFVLVNGA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1235g00016 250 MobiDBLite consensus disorder prediction 52 70 - -
Gabi1235g00016 250 Gene3D - 69 248 IPR029057 -
Gabi1235g00016 250 CDD PRTases_typeI 116 246 IPR000836 -
Gabi1235g00016 250 Pfam Phosphoribosyl transferase domain 108 236 IPR000836 -
Gabi1235g00016 250 FunFam Adenine phosphoribosyltransferase 1 70 249 - -
Gabi1235g00016 250 NCBIfam adenine phosphoribosyltransferase 83 247 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gabi1235g00016 250 Hamap Adenine phosphoribosyltransferase [apt]. 82 249 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gabi1235g00016 250 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 70 248 - -
Gabi1235g00016 250 MobiDBLite consensus disorder prediction 52 77 - -
Gabi1235g00016 250 SUPERFAMILY PRTase-like 84 243 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1235g00016 Gabi-Chr1235 112904 117011 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1235g00016 75 250 PRT Gene Family AT1G27450 83.523 2.54e-109 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1235g00016 K00759 - gmx:100305792 363.229