Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1235g00011 ATGCTGGAAAGAGAGCACGGTGACAAGATGAATATGCTGATTTTCAAGTGTCTTCAGATTGCTTTGCTGCTAGTTTTCTCTGGCAGATACACCATAGCAGAAAAGAAAACACAGCAATCTAAGTGGACATACATAATTCACATGGACAAGTTCAATATGCCGGCAAGTTTCAACGATCATCTCCACTGGTATGATTCATCCCTAAAATCAGTATCAGAATCTGCAGAGATGCTGTACACCTACGAACATGTAGCTCATGGCTTCTCCACAAGGCTAACTAACCAAGAAGCAGAGTTACTCGCAAAGCAACCGGGAATTCTGTCGGTTATCCCTGAAGTTAGGTATGAGCTTCATACAACTCGAACACCAGAGTTCCTCGGCTTGGAAAACACCACCACCACCACCACTCCTCTTTCGCTTGCCTCTGGAAAACAGAGCGAGGTGGTTGTTGGACTACTAGACACTGGTGTATGGCCTGAACTAAAAAGCTTCGATGACACGGGACTTGGTCCAGTACCCAGTAGCTGGAAAGGCGTGTGTGAGACAGGTAAAAACTTCAACTCATCAAACTGTAACAGGAAGCTTGTTGGTGCAAGGTTTTTCCCCAAAGGCTACGAGGCAGCTTTTGGACCCATTGATGAAAAGGAAGAATCAAGGTCACCAAGGGATGATGATGGCCACGGAAGTCACACATCAACTACAGCTGCAGGTTCTGCAGTTGCAAGAGCTAGCCTCTTTGGTTATGCTTCTGGGACAGCAAGAGGCATGGCCACACAAGCCCGAGTGGCCACTTACAAAGTATGTTGGCTTGGTGGGTGCTTTACATCAGACATCGTTGCTGGAATTGACAAGGCCATCGCAGATGGTGTCAACATCCTTTCCATGTCTATTGGGGGAGGTTTACAGGACTACTACAAAGACATTGTTTCTATTGGAACATTTGCAGCCACAGCACATGGAATACTAGTATCTATTTCAGCAGGAAATGGTGGGCCTAGTGTAGGAACTTTGTCTAATGTGGCGCCATGGACAATCACTGTGGGTGCTGGAACTATAGACCGTAATTTCCCTGCCTATATCACCCTTGGAAATGGGAAGAGATACACGGGTGCATCTCTTTACAATGGCAAACTACCATCTGATTCTCCACTACCACTTGTTTATGCTGGTAATGTTAGCAAAGAATCCGACGGAAATCTGTGTACCACAGGTAGTTTGATTCCTGAAAAAGTTAAAGGAAAAATCGTGATATGTGATCGAGGAAGCAGTGGTAGAGTGGCAAAGGGTTCGGTGGTCAAGAGTGCTGGAGGCGTTGGGATGATTTTAGCAAACAATGAATACTACGGGGAAGAGCTATTTGCTGACCCCTATCTCCTCCCTGCAGCAGCTTTGGGCCAGAATGCCGGCGATGAAGTAAAGAAGTATGTTTTCTCTGCTCACAATCCCACGGCTAAATTTGCATTCGGTGGCACCCAGTTAGGGTTACAACCGTCCCCAGTTGTGGCAGCTTTCAGCGCAAGAGGACCAAATGTGCTGACGCCAAAAATACTCAAGCCAGACCTGATAGCTCCAGGAGTCAACATCCTAGCTGGGTGGAGTGGTGCAGTTGGACCAACTGGCTTGGACGTTGACAAAAGGCATGTGAGCTTCAATATCATCTCTGGAACATCCATGTCATGCCCCCATGTCAGTGGTTTAGCTGCACTCCTTAAGGGAGCTCACCCAGAATGGAGCCCTGCAGCTATAAGGTCTGCCTTTATGACTACAGCCTACAGAACCTACAAAAATGGGCAACCCATACAAGATATTGCCACTGGGGTACAAGCTACACCGCTTGATTATGGTGCTGGACACGTGGATCCAGTAGCTGCTCTTGATCCCGGTCTTGTGTATGATGCTACTGTGGATGACTACTTGAGCTTCTTCTGTGCCTTGAACTACACTTCGTCTCAAATAAAGCTTGCTACAAGAAGACAGTTTACCTGCAACAAAAGGATTAAGTACAGAGTGGAAGATCTCAATTACCCATCTTTTGCTGTTCCTTTTGATGCAGATGATTCAGGCATACGGGGTGGTTCTCAGAAACCAAGCACTGTCCAGTATAAAAGGATTTTATCTAACGTGGGCACCCCCTCAACATATACAGTTTCAGTGTTATCGATGTCTCCCTCAGTGAAGATTGTAGTTGAACCACAAACACTAAGTTTCGGGAAACTGTACGAAAAGAAGAGCTACACGGTTACATTCACGTCTTCTTCTTCAATGCCTTTTGGCACAAACACCTTTGCTCATCTGGAATGGTCGGATGGGAAACATAAGGTCACTAGTCCCATTGCTTTCAGCTGGAATTGA 2352 0.4626 MLEREHGDKMNMLIFKCLQIALLLVFSGRYTIAEKKTQQSKWTYIIHMDKFNMPASFNDHLHWYDSSLKSVSESAEMLYTYEHVAHGFSTRLTNQEAELLAKQPGILSVIPEVRYELHTTRTPEFLGLENTTTTTTPLSLASGKQSEVVVGLLDTGVWPELKSFDDTGLGPVPSSWKGVCETGKNFNSSNCNRKLVGARFFPKGYEAAFGPIDEKEESRSPRDDDGHGSHTSTTAAGSAVARASLFGYASGTARGMATQARVATYKVCWLGGCFTSDIVAGIDKAIADGVNILSMSIGGGLQDYYKDIVSIGTFAATAHGILVSISAGNGGPSVGTLSNVAPWTITVGAGTIDRNFPAYITLGNGKRYTGASLYNGKLPSDSPLPLVYAGNVSKESDGNLCTTGSLIPEKVKGKIVICDRGSSGRVAKGSVVKSAGGVGMILANNEYYGEELFADPYLLPAAALGQNAGDEVKKYVFSAHNPTAKFAFGGTQLGLQPSPVVAAFSARGPNVLTPKILKPDLIAPGVNILAGWSGAVGPTGLDVDKRHVSFNIISGTSMSCPHVSGLAALLKGAHPEWSPAAIRSAFMTTAYRTYKNGQPIQDIATGVQATPLDYGAGHVDPVAALDPGLVYDATVDDYLSFFCALNYTSSQIKLATRRQFTCNKRIKYRVEDLNYPSFAVPFDADDSGIRGGSQKPSTVQYKRILSNVGTPSTYTVSVLSMSPSVKIVVEPQTLSFGKLYEKKSYTVTFTSSSSMPFGTNTFAHLEWSDGKHKVTSPIAFSWN 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1235g00011 783 PRINTS Subtilisin serine protease family (S8) signature 554 570 IPR015500 -
Gabi1235g00011 783 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Gabi1235g00011 783 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Gabi1235g00011 783 FunFam subtilisin-like protease SBT1.5 353 493 - -
Gabi1235g00011 783 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 118 IPR037045 -
Gabi1235g00011 783 ProSitePatterns Serine proteases, subtilase family, serine active site. 555 565 IPR023828 -
Gabi1235g00011 783 Pfam Fibronectin type-III domain 672 779 IPR041469 -
Gabi1235g00011 783 Gene3D - 642 782 - -
Gabi1235g00011 783 ProSiteProfiles Serine proteases, subtilase domain profile. 114 625 - -
Gabi1235g00011 783 CDD Peptidases_S8_3 115 591 IPR034197 -
Gabi1235g00011 783 Pfam PA domain 385 471 IPR003137 -
Gabi1235g00011 783 SUPERFAMILY Subtilisin-like 117 629 IPR036852 GO:0004252|GO:0006508
Gabi1235g00011 783 MobiDBLite consensus disorder prediction 211 234 - -
Gabi1235g00011 783 FunFam Subtilisin-like protease SBT1.9 32 118 - -
Gabi1235g00011 783 MobiDBLite consensus disorder prediction 211 229 - -
Gabi1235g00011 783 Gene3D - 353 494 - -
Gabi1235g00011 783 SUPERFAMILY PA domain 383 448 IPR046450 -
Gabi1235g00011 783 Pfam Subtilase family 146 603 IPR000209 GO:0006508|GO:0008236
Gabi1235g00011 783 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 44 779 IPR045051 -
Gabi1235g00011 783 Pfam Peptidase inhibitor I9 43 118 IPR010259 -
Gabi1235g00011 783 FunFam Subtilisin-like protease SBT1.5 147 363 - -
Gabi1235g00011 783 CDD PA_subtilisin_like 359 485 - -
Gabi1235g00011 783 Gene3D Peptidase S8/S53 domain 148 638 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1235g00011 Gabi-Chr1235 62594 65196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1235g00011 22 782 Subtilisin-like Serine Gene Family AT5G67360 63.732 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1235g00011 - - gmx:100794284 1260.36