Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1235g00008 ATGGTCATCACAAACTTCAACGGAGCCGGCGTCGGATTTGGTTTCGGTGTAGGTTGCGGTTTCGGGGTAGGATGGGGCTTCGGAGGTATGCCATTGAACTTTTTGGGTCTTGGTGTAGGTGGAGGCTGTGGCGTTGGAGTAGGACTTGGTTGGGGTTTTGGGACTGCTTTTGGTAGTAAGTATCGGTCATCACGGATCACATTTCAAGGAGTGGAATTTGATAATAAAGAGAAAGGTAACAGTACAGAGATCTCTAAACCCAGCCCAGAACTAAGCCAACACAAATCCAAGAAAGACTGTTGGCTTGTGATCAATGGCAGAGTGGTGGATGTCACAAAGTTCTTGGAGGAACACCCTGGAGGGGAAGAGGTGCTGCTAGAGTTTGCTGGGAAAGATGCAACGAAGGAGTTTGATGCTATTGGACACAGTAGTGGTGCTCAAAACTTGCTCCTCAAATACCAAGTAGGTGTCCTCCAAGGTGCCGCAATTCAAGAGGTTGACTTAAAGGATGTTACGGACAAGGAATCTAAGAGCCAAGAGATGAGTGCTTTCGTGGTCAAAGAAGATGCCATGTCCAACTCTGTGGCATTTTACGAGTTCTTTGTTCCAATTCTTGTTGCCACTCTCTATTTTGGTTACCGATGCCTCACCAGAGCAGACCCTATTACTTACTAG 675 0.4696 MVITNFNGAGVGFGFGVGCGFGVGWGFGGMPLNFLGLGVGGGCGVGVGLGWGFGTAFGSKYRSSRITFQGVEFDNKEKGNSTEISKPSPELSQHKSKKDCWLVINGRVVDVTKFLEEHPGGEEVLLEFAGKDATKEFDAIGHSSGAQNLLLKYQVGVLQGAAIQEVDLKDVTDKESKSQEMSAFVVKEDAMSNSVAFYEFFVPILVATLYFGYRCLTRADPITY 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1235g00008 224 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 114 121 IPR018506 GO:0020037
Gabi1235g00008 224 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 90 161 IPR036400 -
Gabi1235g00008 224 PRINTS Cytochrome B5 signature 146 158 IPR001199 -
Gabi1235g00008 224 PRINTS Cytochrome B5 signature 108 118 IPR001199 -
Gabi1235g00008 224 PRINTS Cytochrome B5 signature 118 132 IPR001199 -
Gabi1235g00008 224 PRINTS Cytochrome B5 signature 133 140 IPR001199 -
Gabi1235g00008 224 FunFam Cytochrome b5 type B 82 163 - -
Gabi1235g00008 224 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 90 159 IPR001199 -
Gabi1235g00008 224 PANTHER CYTOCHROME B5 88 216 - -
Gabi1235g00008 224 Pfam Cytochrome b5-like Heme/Steroid binding domain 90 158 IPR001199 -
Gabi1235g00008 224 SMART Cyt_b5_2 87 159 IPR001199 -
Gabi1235g00008 224 Gene3D - 86 163 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1235g00008 Gabi-Chr1235 46993 52449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1235g00008 90 219 NADPH P450 reductases AT5G48810 44.275 8.03e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1235g00008 - - gmx:100797990 313.538