Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1234g00005 ATGATAATGGATCCACGTCTTCGTGGGTTTAGTAGTTCCACAAATGAAATCCGGTTGGGGAATCAATCTTTGCCTATTCTGCAGAGTCAGAGATTTGAAAATGGTTTCTTTGATCAAAATAGGGGATTTGGTTTCCTTGAGTCCAATCTAATACCAGCTAATGCACCTTCATCCTTGGTTTTGACACATGAGGAATCTTCCCCGGAGGACTGTGATTTTTCTGATGCAGTTTTGGGTTACATCAGTCAGATCCTTATGGAAGAAGAGATGGAAGATAAAACATGCATGCTTCAAGATTCTTTGGATCTTCAAATTGCTGAGAAATCATTCTATGAGGTGATAGGTGAAAAGTACCCACCTTCACCATTAGGTAATCCAACTGATGTGGGTGGAGATAATAACTTGTCTGAAAATTATGGTACTTATCTTGATAATGATGGTGATCTCAGTAGCATTGTTATCAATTCTTTGCTTCGAAACTCGGGGGAAATTCCTAACCAAAATTCTCAAGGCAATAGCATTCAACGGTCATCTTATAGCTTTTCAAATAGTTTGATGAGTAGTGTGGAAGGGCCTGTGGACTCTCCAAACAGTATTCTCCAGGTCCCTCATATGAACAGTGAGATTCAATCCATTTTGCAATTTCAGAAGGGTGTTGAGGAGGCTAGTAAGTTTCTTCCAAGTGGAAATGGACTCTTTGCTAATTTGGATGTGGCTAATTTTTCAACTCTAGAGCCTAAAGAGGAGACTGATGAATCTTTTTGTGTTAAGGTTGAGAAGGATGAGGGGGAGTCTTTTCTTGCTGTATCCAAAGGAAGGAAGCATCCTCATAGAGAAGGAGGAGACATTGAAGAAAATAGAAGCGCCAAGCAAGCGGCGATTTACTCTGAACCGACTTTGCGATCAACTATGATTGATAGAATCCTGCTTTATAGTTTAGGGGATGGTAAGAATTACTATATTTCTCGTCGTGAGGCTTTGCAAAATAAGAACCAGAAGATAGTGCTGCCAAATGGAAAATCAAAAGCTACCAATAGTGGGAAGGGACGAGGTAAGAAGCAAAACGGGAAAAAGGAAGTGGTTGATTTGAGAACACTTCTGATTCTTTGTGCACAAGCTGTTGCAGCAGATGACTATAAAAGTGCGCATGAGTTTCTGAAGCAGATCAGGCAGCACTCAAACCCTTTTGGGGATGGAAATCAGAGGTTGGCTCATATCTTTGCTGATGGCCTCGAAGCACGCTTGGCTGGTACTGGAAGCCAAATTTACAAAGGACTTGTTAGTAAAAAAGCATCAGCTGCTGATTATCTGAAAGCTTTTCATCTATACCTTGCTGCTTGTCCTTTTAGGAAGATATCTAGTTTTATCTCAAATGTTACAATAAGGACATCTGCAGCAAACTCAATGAGAGTCCATGTTATAGATTTTGGTATCCTTTATGGTTTCCAGTGGCCTACTTTAATACAGAGACTTTCATTAAGGCATGGAGGACCACCCAAACTTAGGATTACAGGAATAGACTTCCCACAACCTGGTTTCAGGCCTGCGGAGAGAATTATAGAAACTGGACGCCGCCTGGCAGCATATGCTGAGACCTTTAATGTGCCATTTGAGTATAATGCTATAGCAAAAAAATGGGAAACAGTTCAACTTGAGGAACTCAAGATTGATAGGGATGAGTACCTTGTTGTTACCTGTTTTTATCGCGGTAAAAACTTGTTGGATGAATCTGTGGTAGTAGAAAGTCCAAGGAATAATTTCCTCAGTTTGATAAGGAAGATCAACCCGGATATATTCATTCATTGTCTTATTAATGGGGCCTTTAATGCCCCTTTCTTTGTTACTCGATTCAGGGAGGCATTGTTTCACTATTCTTCACTTTTTGATATGCTGGAAACTATTGTGCCCCGTGAGGACTGGGAGAGGATGCTGATTGAGAAAGATATATTTGGGAGGGAAGCATTGAATGTTATAGCTTGTGAAGGGTATGAAAGAGTAGAGAGACCAGAGACATATAGGCAATGGCAAGTTCGAATTCTACGAGCTGGGTTTTTGCAACAACCTTTTGATCGCGATATAGTAGAGAGGGCAATGATGAAAGTAAGGTGTAGCTACCACAAGGATTTTGTAATTGATGAAGATAATCAGTGGATGTTGCAAGGTTGGAAGGGGAGAATTGTTTATGCCCTTTCTTGTTGGAAACCTGCATGA 2211 0.4057 MIMDPRLRGFSSSTNEIRLGNQSLPILQSQRFENGFFDQNRGFGFLESNLIPANAPSSLVLTHEESSPEDCDFSDAVLGYISQILMEEEMEDKTCMLQDSLDLQIAEKSFYEVIGEKYPPSPLGNPTDVGGDNNLSENYGTYLDNDGDLSSIVINSLLRNSGEIPNQNSQGNSIQRSSYSFSNSLMSSVEGPVDSPNSILQVPHMNSEIQSILQFQKGVEEASKFLPSGNGLFANLDVANFSTLEPKEETDESFCVKVEKDEGESFLAVSKGRKHPHREGGDIEENRSAKQAAIYSEPTLRSTMIDRILLYSLGDGKNYYISRREALQNKNQKIVLPNGKSKATNSGKGRGKKQNGKKEVVDLRTLLILCAQAVAADDYKSAHEFLKQIRQHSNPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVSKKASAADYLKAFHLYLAACPFRKISSFISNVTIRTSAANSMRVHVIDFGILYGFQWPTLIQRLSLRHGGPPKLRITGIDFPQPGFRPAERIIETGRRLAAYAETFNVPFEYNAIAKKWETVQLEELKIDRDEYLVVTCFYRGKNLLDESVVVESPRNNFLSLIRKINPDIFIHCLINGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKDIFGREALNVIACEGYERVERPETYRQWQVRILRAGFLQQPFDRDIVERAMMKVRCSYHKDFVIDEDNQWMLQGWKGRIVYALSCWKPA 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1234g00005 736 MobiDBLite consensus disorder prediction 337 356 - -
Gabi1234g00005 736 ProSiteProfiles GRAS family profile. 354 734 IPR005202 -
Gabi1234g00005 736 Pfam GRAS domain family 363 734 IPR005202 -
Gabi1234g00005 736 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 341 727 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1234g00005 Gabi-Chr1234 89225 93181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1234g00005 69 735 GRAS Transcription Factor Family AT2G37650 52.874 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi1234g00005 GRAS 1.3e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1234g00005 - - ccaj:109816616 1187.17