Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1233g00024 ATGGGGGCGGAGGATGAAATTTCTCCGGCCGATGGTCATAGGGTTCCCGGCAAGGAACAGCAAGCCGCCGGCGTCGGAATCCTTCTTCAGATCATGATGTTGGTGTTGTCTTTCGTTCTCGGTCACGTTCTCCGTCGTAAGAAGATTTACATCATTCCTGAAGCCAGTGCTTCTCTTCTCATAGGGTTAATTGTTGGTGTACTAGCTAACATTTCAGACACTGAAAATAATATTAGGTCGTGGTTCAATTTTCATGAGGAGTTTTTCTTCCTGTTCCTGTTACCTCCCATCATATTTCAGTCTGGGTTCAGTCTCTCACCTAAACCCTTTTTCTCAAATTTTGGTGCAATTGTGACTTTTGCTATATTTGGTACCTTTCTAGCTTCATTTGTTACTGGTGTCTTGGTTTATCTTGGTGGGTTGGTCTTCCTCATGTATAGACTACCTTTTGTTGAGTGCATGATGTTTGGTGCTCTTATATCAGCAACTGATCCTGTTACTGTTTTGTCCATATTTCAGGAGCTGGGCACAGATGTCAATCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCGTTGTACAGAACAATGGCATTGGTTAAAACTCAACCGTCTGGACAAAATTTATTGATGGTGGTTGTTAGATTTTTGGAGACTTTTGTTGGGTCATTGTCTGCAGGTGTTGGAGTTGGATTTACATCTGCTTTACTATTTAAGTATGCAGGGTTGGATGTTGACAACCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTTTTCCCATATTTCTCGTACATGCTTGCAGAGGGCATTGGTCTGTCTGGTATTGTATCAATACTGTTCACAGGAATAGTCATGAAGCATTATTCGTATTCAAATTTGTCCCAAAGTTCTCAAAGATTTGTCTCTGCTTTTTTCGAGTTGATATCGTCACTAGCAGAAACATTTGTATTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATATTCATTGGAATTGCAAGGGCGGCAAATGTCTTCTCTTGTGCTTATCTTGTCAATCTGGTCAGACCCAATCATAGAAAGATACCTGCAAAACACCAGAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCAGTTCACGATCTTCCAGAAGGACATGGCCAGACCATCTTCACTGCAACTACAGCAATAGTTGTTTTGACGGTATTGCTGATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTTATAGGTGGTGAAAGTCATAATGATAGCCCTTTGGCTTCAAATTACGATGGAAACAATGGTTATATTGCTCCTTCTTACGATGAAGAATCATCCTCGGGGAACAAAATCAAGATGAAGTTAAAAGAATTCCACAAGAGTGCTGCATCTTTTACGGCATTAGATAAAAACTACCTCACCCCATTCTTTACAAGTCATAACGGAGATGAAGATGAAGCCGAGCCTTTTACTTCGACAAGATCGGGATTTCATGGACATGACCATTATTCATCATGA 1593 0.4093 MGAEDEISPADGHRVPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYIIPEASASLLIGLIVGVLANISDTENNIRSWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFSNFGAIVTFAIFGTFLASFVTGVLVYLGGLVFLMYRLPFVECMMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMALVKTQPSGQNLLMVVVRFLETFVGSLSAGVGVGFTSALLFKYAGLDVDNLQNLESCLFVLFPYFSYMLAEGIGLSGIVSILFTGIVMKHYSYSNLSQSSQRFVSAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLVRPNHRKIPAKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVIGGESHNDSPLASNYDGNNGYIAPSYDEESSSGNKIKMKLKEFHKSAASFTALDKNYLTPFFTSHNGDEDEAEPFTSTRSGFHGHDHYSS 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1233g00024 530 MobiDBLite consensus disorder prediction 508 530 - -
Gabi1233g00024 530 Gene3D - 150 201 - -
Gabi1233g00024 530 PRINTS Na+/H+ exchanger signature 88 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi1233g00024 530 PRINTS Na+/H+ exchanger signature 102 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi1233g00024 530 PRINTS Na+/H+ exchanger signature 117 125 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi1233g00024 530 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi1233g00024 530 PANTHER SODIUM/HYDROGEN EXCHANGER 18 515 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Gabi1233g00024 530 Pfam Sodium/hydrogen exchanger family 33 436 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Gabi1233g00024 530 NCBIfam sodium/hydrogen exchanger 3 31 447 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1233g00024 Gabi-Chr1233 183766 190942 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1233g00024 19 438 Antiporters AT3G05030 33.107 1.04e-51 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1233g00024 K14724 - gmx:100790830 895.96