Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1233g00007 ATGGCTAACAAAAACACAAAGGAGGTTGTGTGCGTCACCGGAGCCAACGGTTTCATAGGGTCGTGGCTGGTTCGAACCCTCTTGGAAAACCCACGCTACACCACCATCAACGCCACCGTCTTCCCCGGTTCCGACCACTCCCACCTCTTTACACTCCACCCTGACGCCAAAACCCGCGTCACCGTCTTCTACGCCGACATTATCGACGCCTCCGCCGTGTCCCGCGCCGTCGACGGCTGCTCCGGCGTATTCCACGTGGCGTCCCCGTGTACACTCGAGGACCCCGCGGACCCACTCAAGGAGCTGGTGCAACCCGCGGTGCAGGGCACCCTGAACGTTCTAGAAGCCGCGAGGCGCGTCGGCGGCGTGAAGCGCGTGGTCCTCACCTCCTCGATCTCCGCCATGGTCCCGAACCCTAAATGGCCGCAAGGCAAGGTGGTCGACGAGTCGTCGTGGACGGATGTCGAGTACTGCAAGTCGCGGCGGAAGTGGTATCCGGTGTCGAAGACGGAGGCGGAGAGGGCGGCGTGGGAGTTCAAGGGGAAGCACGGCGTGGACGTGGTGGCGATTCACCCGGCGACGTGTCTGGGGCCGTTGCTGCAGCCGTCGCTGAATGCTAGCTCCGCCGTGCTGCAGCGGTTGATGATGGGGTCAATGGAGACACAGGAGTATCATTGGTTGGGTGGTGTGCATGTTAAGGATGTTGCTAAAGCTCATGTTTTGCTTTATGAGACTCCCACTGCTGCTGGCAGATATCTGTGTACTAATGGTATCTACCAGTTTTCTAGTTTTGCCAACACTGTCTCTGAATTGTACCCTCATTTCCCTATTCACAGGTTTCCAGCGGAAACTCAACCTGGCCTTACACCATGTAAAGATGCAGCAAGGAGGCTAATAGACTTGGGCCTTGTCTTCACACCAGTTGAAGATGCTGTGAGAGAAGCAGCGGAGAGCCTTATAGCTAAAGGCTTCCTGCAGCAAACGCCCTCACGGAATTAG 999 0.5766 MANKNTKEVVCVTGANGFIGSWLVRTLLENPRYTTINATVFPGSDHSHLFTLHPDAKTRVTVFYADIIDASAVSRAVDGCSGVFHVASPCTLEDPADPLKELVQPAVQGTLNVLEAARRVGGVKRVVLTSSISAMVPNPKWPQGKVVDESSWTDVEYCKSRRKWYPVSKTEAERAAWEFKGKHGVDVVAIHPATCLGPLLQPSLNASSAVLQRLMMGSMETQEYHWLGGVHVKDVAKAHVLLYETPTAAGRYLCTNGIYQFSSFANTVSELYPHFPIHRFPAETQPGLTPCKDAARRLIDLGLVFTPVEDAVREAAESLIAKGFLQQTPSRN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1233g00007 332 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 313 - -
Gabi1233g00007 332 FunFam Cinnamoyl-CoA reductase 1 3 332 - -
Gabi1233g00007 332 CDD FR_SDR_e 10 303 - -
Gabi1233g00007 332 Pfam NAD dependent epimerase/dehydratase family 10 248 IPR001509 -
Gabi1233g00007 332 Gene3D - 1 332 - -
Gabi1233g00007 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 318 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1233g00007 Gabi-Chr1233 82151 84107 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1233g00007 7 325 Monolignol Biosynthesis Gene Families AT2G02400 67.398 3.31e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1233g00007 - - vra:106775739 536.954