Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1232g00009 ATGGGTAACGGAATAGGAAAGCTAACTGTGTGTTTCACCGGCAACGGAGGAGGCGGTCGCCGGAAGCAGGACATATCGATTTTTATAACGGAGCCACTGGATGAGGGACTTGGCCACTCCTTCTGCTACGTTCGACCCGACCCGACCCGGATATCTTCATCGAAGGTCCACTCAGAAGAAACCACGACGTTCAGAACAATCTCCGGTGCATCGGTGAGCGCGAACACGTCGACGCCGCTCTCGACGTCGCTCGTGGACTTGTACTCCTACGGTTGCATCGATAGAGCTGCGGCTTTTGAGAGTTCAACCTCGTTTGCTTCGCTTCCTCTGCAACCGATTCCGAGAAATCTCATGAGTTCGGGTCCCTTTTCAGGGAATCTGGGTGGTGGGGTTCCGGGTTCGGGTCCTATGGAGAGAGGGTTCTTGTCGGGTCCAATCGAGCGTGGGTTCATGTCGGGTCCAATCGATCGCGGGTTGTTTTCGGGTCCGATGGAAAAGGATAGCTCCGATCAGTTTCAAAGAAGCTTCTCGCATGGGGGTTTAGGTTTTGGTTTAAGACCAAGAACAAGGAAGGGTCGGTGGATTCGGATTCTTCGGAGGGCGATTTCGAAGACTCTGTCTCGTGGGCAAAACTCGATTGTTGCTCCGATCAAAGGTGGGGTAAAGGAACCGGAGTGGATCGTTGCGGCGGAGAAGCACCACAACGAGAATTTAACGGTGAGCAGTGTGAATCTGAGTAGCGAGGGTAGTTTGGAAGACGATGATTCAATGGAAAATCAGAATCTTCAATGGGCTCAGGGGAAAGCAGGTGAGGATCGTGTTCACGTGGTAGTTTCAGAGGAACACGGTTGGGTTTTCGTGGGGATTTACGATGGTTTCAATGGTCCTGATGCACCTGATTACCTCCTTTCAAATCTATACACCGCCGTGCATAAGGAACTGAAGGGTTTGTTGTGGGATGATGGGGTTCCTCTAGAGAATTCGAATTTGGAAGTGCGAGATTCGATTCCATTCGATGATGGTGATTTTGGGAAGGAGGACAAGTTGGTAATAGATACTTGTTCTCATTGTGTTGAAGAAGAGAATAATGGTCCGTATGCAAGTGGGGATGTGGTGTTGAAGAGAAAAAGTGGTAAGAATTCCAAGAACAAGTATAGAGGTGCAGCTAAGAAATGGGAGGAGAATCAAAGGAGGTGGAAGTGTGAATGGGATCGTGAAAGAGTAGAGCTTGATAGAAGATTGAAGGAACAGCTAAGTCTAAGTCGATCTGGTTCTGGTGGAACCAACTCTATTAATCATTCAGATGTTTTGGAAGCTCTCTCTCGAGCTCTCAGGAAAACAGAAGAGTCTTATCTTGATGTTGCGGATAAGATGGTTGGGGAGAATCCTGAACTTGCTTTGATGGGTTCTTGTGTTCTTGTGATGTTAATGAAGGGGGAAGATGTTTATGTGATGAATGTAGGTGATAGTAGAGCTGTGCTGGCTCAAAAGGCTGAGCCTGATTATTGGCTTGGGAAAATCAGACAGGACTTGGAGAGGATCAATGAAGAGACAATGAATGATCTTGAATCATGGGATGTTGATACATCAAACTTGGTTCCTAGTCTAAGTGCAATTCAGCTTACCAAGGATCATAGTACCAATGTTGAAGAAGAAGTCCAGAGAATAAAAAAAGAGCACCCAGATGATACTTGTGCTGTAGTAAATGATCGTGTTAAGGGTTCTCTCAAGGTTACCCGAGCATTTGGTGCTGGATTTCTCAAACAGCCCAAGTGGAACAATGCACTTCTGGAAATGTTTAGAATAGACTATGTAGGAAATTCTCCTTACATAAGCTGTCTACCATATCTAAAACACCACAGATTAGGCCCAAAGGATAAATTTTTGATATTATGCTCCGATGGGCTCTATCAATACTTGTCAAACGAAGAAGCAGTTGCTGAAGTTGAGCTTTTCATCACATTGCAACCTGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTGTTATTTCGTGCTGCTAAGAAAGCTGGTTTGGACTTTCACGAATTGCTCGAAATTCCACAGGGTGATAGGCGTCGTTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAGGGAAGGATATGGAGATCATGTGTATAA 2148 0.4609 MGNGIGKLTVCFTGNGGGGRRKQDISIFITEPLDEGLGHSFCYVRPDPTRISSSKVHSEETTTFRTISGASVSANTSTPLSTSLVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNLMSSGPFSGNLGGGVPGSGPMERGFLSGPIERGFMSGPIDRGLFSGPMEKDSSDQFQRSFSHGGLGFGLRPRTRKGRWIRILRRAISKTLSRGQNSIVAPIKGGVKEPEWIVAAEKHHNENLTVSSVNLSSEGSLEDDDSMENQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTAVHKELKGLLWDDGVPLENSNLEVRDSIPFDDGDFGKEDKLVIDTCSHCVEEENNGPYASGDVVLKRKSGKNSKNKYRGAAKKWEENQRRWKCEWDRERVELDRRLKEQLSLSRSGSGGTNSINHSDVLEALSRALRKTEESYLDVADKMVGENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDVDTSNLVPSLSAIQLTKDHSTNVEEEVQRIKKEHPDDTCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYISCLPYLKHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1232g00009 715 Gene3D - 231 711 IPR036457 -
Gabi1232g00009 715 PANTHER PROTEIN PHOSPHATASE 2C 252 704 IPR015655 GO:0004722|GO:0006470
Gabi1232g00009 715 SUPERFAMILY PP2C-like 268 707 IPR036457 -
Gabi1232g00009 715 SMART PP2C_4 255 704 IPR001932 -
Gabi1232g00009 715 CDD PP2Cc 428 706 IPR001932 -
Gabi1232g00009 715 FunFam probable protein phosphatase 2C 4 229 711 - -
Gabi1232g00009 715 ProSiteProfiles PPM-type phosphatase domain profile. 253 706 IPR001932 -
Gabi1232g00009 715 Pfam Protein phosphatase 2C 428 662 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1232g00009 Gabi-Chr1232 47332 50447 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1232g00009 1 715 PP2C-type Phosphatase Gene Family AT1G07630 70.386 0.0 963
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1232g00009 - - gmx:100812903 1203.73