Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1232g00007 ATGGGTAACGGAATAGGAAAGCTAACTGTGTGTTTCACCGGCAACGGAGGAGGCGGTCGCCGGAAGCAGGACATATCGATTTTTATAACGGAGCCACTGGATGAGGGACTTGGCCACTCCTTCTGCTACGTTCGACCCGACCCGACCCGGATATCTTCATCGAAGGTCCACTCAGAAGAAACCACGACGTTCAGAACAATCTCCGGTGCATCGGTGAGCGCGAACACGTCGACGCCGCTCTCGACGTCGCTCGTGGACTTGTACTCCTACGGTTGCATCGATAGAGCTGCGGCTTTTGAGAGTTCAACCTCGTTTGCTTCGCTTCCTCTGCAACCGATTCCGAGAAATCTCATGAGTTCGGGTCCCTTTTCAGGGAATCTGGGTGGTGGGGTTCCGGGTTCGGGTCCTATGGAGAGAGGGTTCTTGTCGGGTCCAATCGAGCGTGGGTTCATGTCGGGTCCAATCGATCGCGGGTTGTTTTCGGGTCCGATGGAAAAGGATAGCTCCGATCAGTTTCAAAGAAGCTTCTCGCATGGGGGTTTAGGTTTTGGTTTAAGACCAAGAACAAGGAAGGGTCGGTGGATTCGGATTCTTCGGAGGGCGATTTCGAAGACTCTGTCTCGTGGGCAAAACTCGATTGTTGCTCCGATCAAAGGTGGGGTAAAGGAACCGGAGTGGATCGTTGCGGCGGAGAAGCACCACAACGAGAATTTAACGGTGAGCAGTGTGAATCTGAGTAGCGAGGGTAGTTTGGAAGACGATGATTCAATGGAAAATCAGAATCTTCAATGGGCTCAGGGGAAAGCAGGTGAGGATCGTGTTCACGTGGTAGTTTCAGAGGAACACGGTTGGGTTTTCGTGGGGATTTACGATGGTTTCAATGGTCCTGATGCACCTGATTACCTCCTTTCAAATCTATACACCGCCGTGCATAAGGAACTGAAGGGTTTGTTGTGGGATGATGGGGTTCCTCTAGAGAATTCGAATTTGGAAAGAAAAAGTGGTAAGAATTCCAAGAACAAGTATAGAGGTGCAGCTAAGAAATGGGAGGAGAATCAAAGGAGGTGGAAGTGTGAATGGGATCGTGAAAGAGTAGAGCTTGATAGAAGATTGAAGGAACAGCTAAGTCTAAGTCGATCTGGTTCTGGTGGAACCAACTCTATTAATCATTCAGATGTTTTGGAAGCTCTCTCTCGAGCTCTCAGGAAAACAGAAGAGTCTTATCTTGATGTTGCGGATAAGATGGTTGGGGAGAATCCTGAACTTGCTTTGATGGGTTCTTGTGTTCTTGTGATGTTAATGAAGGGGGAAGATGTTTATGTGATGAATGTAGGTGATAGTAGAGCTGTGCTGGCTCAAAAGGCTGAGCCTGATTATTGGCTTGGGAAAATCAGACAGGACTTGGAGAGGATCAATGAAGAGACAATGAATGATCTTGAATCATGGGATGTTGATACATCAAACTTGGTTCCTAGTCTAAGTGCAATTCAGCTTACCAAGGATCATAGTACCAATGTTGAAGAAGAAGTCCAGAGAATAAAAAAAGAGCACCCAGATGATACTTGTGCTGTAGTAAATGATCGTGTTAAGGGTTCTCTCAAGGTTACCCGAGCATTTGGTGCTGGATTTCTCAAACAGCCCAAGTGGAACAATGCACTTCTGGAAATGTTTAGAATAGACTATGTAGGAAATTCTCCTTACATAAGCTGTCTACCATATCTAAAACACCACAGATTAGGCCCAAAGGATAAATTTTTGATATTATGCTCCGATGGGCTCTATCAATACTTGTCAAACGAAGAAGCAGTTGCTGAAGTTGAGCTTTTCATCACATTGCAACCTGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTGTTATTTCGTGCTGCTAAGAAAGCTGGTTTGGACTTTCACGAATTGCTCGAAATTCCACAGGGTGATAGGCGTCGTTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAGGGAAGGATATGGAGATCATGTGTATAA 2019 0.4631 MGNGIGKLTVCFTGNGGGGRRKQDISIFITEPLDEGLGHSFCYVRPDPTRISSSKVHSEETTTFRTISGASVSANTSTPLSTSLVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNLMSSGPFSGNLGGGVPGSGPMERGFLSGPIERGFMSGPIDRGLFSGPMEKDSSDQFQRSFSHGGLGFGLRPRTRKGRWIRILRRAISKTLSRGQNSIVAPIKGGVKEPEWIVAAEKHHNENLTVSSVNLSSEGSLEDDDSMENQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTAVHKELKGLLWDDGVPLENSNLERKSGKNSKNKYRGAAKKWEENQRRWKCEWDRERVELDRRLKEQLSLSRSGSGGTNSINHSDVLEALSRALRKTEESYLDVADKMVGENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDVDTSNLVPSLSAIQLTKDHSTNVEEEVQRIKKEHPDDTCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYISCLPYLKHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1232g00007 672 PANTHER PROTEIN PHOSPHATASE 2C 252 661 IPR015655 GO:0004722|GO:0006470
Gabi1232g00007 672 Pfam Protein phosphatase 2C 385 619 IPR001932 -
Gabi1232g00007 672 CDD PP2Cc 268 663 IPR001932 -
Gabi1232g00007 672 FunFam probable protein phosphatase 2C 4 229 668 - -
Gabi1232g00007 672 ProSiteProfiles PPM-type phosphatase domain profile. 253 663 IPR001932 -
Gabi1232g00007 672 SUPERFAMILY PP2C-like 268 664 IPR036457 -
Gabi1232g00007 672 Gene3D - 231 668 IPR036457 -
Gabi1232g00007 672 SMART PP2C_4 255 661 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1232g00007 Gabi-Chr1232 47332 50447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1232g00007 1 672 PP2C-type Phosphatase Gene Family AT1G07630 74.269 0.0 981
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1232g00007 - - gmx:100812903 1174.46