Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1231g00001 ATGGTTAACAACAAGAACAAGGAGAGAGACACTGAGTTTTTCTTGGATCAGAGCAATGAGGATGCTAACGAGGATGAACAGGATATTGAAGCTGTCAAGTACGAGAGTGAGAGTAGTAGTGAAGGTGTCAGTGACAATGAGGAAGGTCCTAGACCAATACCTAATTCTTTTTCTTCTCAGAAATGGCCTCAAAGTTACAAAGAGGCTGTCGATTCTTACACAATTGCTGCAGCTCCAAATCTTGAATCAATTATAAGAGCACCAAGTGTTATTTATTCAAGCTTTGTCGGTCATTCAAAGAGTTACCTAGAACAAGATGCAAAGACTTCTTTACTATCTGGTCAGCTTAGTCAATTTCAAGAAGGGATCTCGAGAAGACAATCAACATGGTGGGAGAAAGCTTCAATTCAAATGCAAATTCCTGAAGAAATACCCATTAATTATGGATGTAGCCTCACTCAAACCATATTTAATGGGATTAATGTGATGGCTGGAGTTGGCCTTTTGTCTGCACCTTTTACAACGAAACAAGCTGGGTGGGCGAGTTTGGTGGTGATGCTTCTTTTTGGAGTTGTATGTTGTTATACGGCAGATCTTATGAGACATTGCTTTGAAAGCAGAGAAGGGATCATTAGCTACCCAGATATAGGCGAAGCTGCATTTGGAAGATATGGACGACTTCTTGTATCAATCATTTTATACACTGAATTATATTCATACTGTATAGAATATATCATCTTGGAAGGAGATAACCTTACTGGGCTGTTTCCTGGAACGTCCTTGAATTGGGGCAGTTTCCATGTTGATTCCAAGCATTTGTTTGGAGTTTTGGCTGCACTTATTATTCTCCCAACTCTTTTGTTGAAGGATCTTCGTATAATCTCCTATCTCTCAGCTGGAGGGGTTGTTGCTACAATTTTAATTACTGTCTGTATATTTGCTGTTGGGACAACAGATGATGTTGGATTCCATCACAATGGTCCACTGTTGAATTGGAGTGGCATTCCATTTGCTTTTGGTATCTATGGGTTTTGCTTTTCTGGACATTCAGTTTTTCCAAATATTTACCAGTCTATGGCTGTCAAAAAAGAATTTAACAAGGCAGTAATGACATGTTTTATTTTATGTGTGTTGATATATGGAAGCGTTGCAATCATGGGGTTTCTCATGTTTGGTGAAGAGACTTCGTCTCAGATAACATTGAATCTGCCACCAAATACATTTGCTTCCAAAGTTGCCAAGTGGACAACAGTGATTAACCCGTTAACCAAATATGCTTTGATGATGAACCCATTGGCAAGGAGTGTAGAAGAGTTGCTGCCGGATAGCATTTCAAGTACTTATTGGTGTTTCATTCTTCTTAGAACAGCACTGCTTATATCTACAGTTTGTGCCGCTTTTCTGATACCCTTTTTTGGGCTTGTGATGGCTTTAATTGGTTCCCTCCTCAGTATACTTGTGGCAGTGATATTGCCGTCTTTATGTTTTCTGAGAATCGTGGGGAATAAAGCAACAAATACACAGGTTGCTCTGAGCGTCGTAATTGCTGCATGGGGAATCACTAGTGCTTTCTTTGGAACATATTCATCAGTATCAAAGATTGTGCAGAGTTTCAGCACAAGTCCAGCCATTTGA 1635 0.3963 MVNNKNKERDTEFFLDQSNEDANEDEQDIEAVKYESESSSEGVSDNEEGPRPIPNSFSSQKWPQSYKEAVDSYTIAAAPNLESIIRAPSVIYSSFVGHSKSYLEQDAKTSLLSGQLSQFQEGISRRQSTWWEKASIQMQIPEEIPINYGCSLTQTIFNGINVMAGVGLLSAPFTTKQAGWASLVVMLLFGVVCCYTADLMRHCFESREGIISYPDIGEAAFGRYGRLLVSIILYTELYSYCIEYIILEGDNLTGLFPGTSLNWGSFHVDSKHLFGVLAALIILPTLLLKDLRIISYLSAGGVVATILITVCIFAVGTTDDVGFHHNGPLLNWSGIPFAFGIYGFCFSGHSVFPNIYQSMAVKKEFNKAVMTCFILCVLIYGSVAIMGFLMFGEETSSQITLNLPPNTFASKVAKWTTVINPLTKYALMMNPLARSVEELLPDSISSTYWCFILLRTALLISTVCAAFLIPFFGLVMALIGSLLSILVAVILPSLCFLRIVGNKATNTQVALSVVIAAWGITSAFFGTYSSVSKIVQSFSTSPAI 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1231g00001 544 MobiDBLite consensus disorder prediction 17 31 - -
Gabi1231g00001 544 FunFam Amino acid transporter AVT1A 148 537 - -
Gabi1231g00001 544 Pfam Transmembrane amino acid transporter protein 151 530 IPR013057 -
Gabi1231g00001 544 Coils Coil 15 35 - -
Gabi1231g00001 544 MobiDBLite consensus disorder prediction 1 16 - -
Gabi1231g00001 544 MobiDBLite consensus disorder prediction 1 61 - -
Gabi1231g00001 544 MobiDBLite consensus disorder prediction 37 61 - -
Gabi1231g00001 544 PANTHER OS05G0424000 PROTEIN-RELATED 155 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1231g00001 Gabi-Chr1231 8927 18949 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1231g00001 3 473 Amino Acid or Auxin Permease AAAP Family AT2G41190 60.625 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1231g00001 K15015 - gmx:100790344 755.362