Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1227g00017 ATGGCTGGCATAGGAGAGACATTGGTGCTAGTTGCTTTATGTGGCACTTGTACTTTCCTTACCTCAATATCGTTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCATACTATCTCATAGGTCGTGCCCTTGGTCCAGAAGTTGGAGTTAGCATTGGTCTATGCTTCTTCCTTGGAAATGCAGTTGCTGGAGCACTTTATGTATTGGGAGCTGTAGAGACGTTTTTGAAAGCTGTTCCTTCTGCTGGGATTTTCAGAGAGACTATCACACAAGTTAATGGTACTGCAGTTGCGCAACCAATAGAGAGTCCAAGTTCTCATGACCTGCAAATTTATGGGATTGTTGTGACGATTGTTTTATGCTTTGTTGTATTTGGAGGAGTAAAGATGATAAATCGGGTTGCACCTGCTTTTCTCATACCTGTTTTATTCTCACTCATCTGCATATTTTTGGGAATTTTTGTGGCAAGAAAGGATCATCCTACAGAGGGAATTACTGGGTTGAGTTTGGAGACGATGAAAGAAAATTGGAGTTCAGATTATCAAAAGACTAACGATGCTGGAATTCCAGAAACTGATGGCTCTGTAAGCTGGAATTTCAATTCATTGGTAGGGCTCTTTTTCCCAGCTGTGACGGGAATAATGGCAGGTTCTAATCGATCATCCTCTTTGAAAGATACTCAGCGATCAATTCCTGTTGGAACACTAGCTGCAACTCTTGTAACTTCTTCTTTGTATCTTATTTCTGTGATAATGCTTGGCGCTGTTGCCAGCAGAGAGAAGCTTTTAACTGACAGGCTACTTACAGCTACAGTTGCCTGGCCTTTTCCTTCATTAATTAAAATCGGGATTATTCTTTCAACTATGGGTGCTGCACTTCAGAGCCTGACTGGTGCCCCACGTCTGCTTGCAGCAATAGCCAATGATGATATTTTACCTATTTTGAACTACTTTAAAGTTGCAGATGGCAGTGAGCCACATGTGGCTACCCTTTTTACCGCATTCCTATGTATCGGGTGTGTCGTTATTGGGAATCTGGACCTTATCACTCCAACTGTAACCATGTTTTTTCTTTTATGTTATTCTGGGGTCAACTTATCCTGCTTCCTTCTCGATCTTCTAGATGCCCCCAGTTGGCGTCCCCGGTGGAAATTTCACCATTGGAGTATGTCGCTTATTGGAGCATTACTTTGCATAGTGATCATGTTCCTAATCTCCTGGTCATTCACTGTGGTGTCCTTGGCCCTTGCAAGCCTTATATACAAGTACGTGAGCATCAAAGGAAAGGCTGGGGACTGGGGAGATGGTTTCAAAAGTGCTTATTTCCAACTTGCACTTCGCAGCCTTCGGTCGCTAGGAGCAAGCCAAGTGCACCCAAAGAATTGGTATCCAATTCCACTGGTATTTTGCCGACCCTGGGGCAAACTGCCGGAAAATGTTCCCTGTCATCCCAAACTCGCAGATTTCGCCAACTGTATGAAGAAGAAAGGTCGAGGAATGTCCATATTTGTCTCTATACTAGATGGGGATTACCATGAATGTGCTGAAGATGCCAAGGCTTCTTGTAAACAACTTAGTACCTACATTGATTACAAGAATTGTGAAGGTGTGGCTGAGATTGTTGTAGCCCCGAACATGTCTGAAGGCTTTCGTGGCATCATTCAGACAATGGGCCTTGGCAATCTCAAGCCTAACATTGTGGTGATGCGTTACCCAGAAATCTGGCGTCGGGAGAATTTAACGGAAATCCCCGCCACCTTTGTTGGGATAATTAATGACTGCATTGTTGCAAACAAGGCAGTAGTTATAGTGAAGGGTCTTGATGAATGGCCTAATGAGTACCAGAAGCAGTATGGTACAATTGATTTGTATTGGATTGTGAGAGATGGTGGTCTCATGCTCCTCCTCTCTCAACTGCTGCTTACCAAGGACAGCTTTGAGAGTTGCAAGATTCAGGTCTTCTGTCTCGCAGAAGATGATGCAGATGCAGAGGGGCTGAAAGCTGATGTGAAAAAATTCCTTTATGATCTTCGGATGCAAGCGGAAGTCTTTGTCATAACAATGATGGGGGATGCACAAATGGACGGTGGTTCTCCGCAAGATGAGTCATTAGAAGCATTTACTAGTGCCCAACAAAGAATTGCTGATTATTTAACCCAAATGAAGTCAGAAGCAGAGAAAGAAGGTACTCCTCTAATGGCTGATGGTAAGCCTGTGGTTGTGAACGAGAAGCAGGTTGAGAAGTTTCTTGACACAACGCTTAAGCTTAATTCAACAATTTTGAGATACTCAAGAATGGCTGCTGTTGTTTTGGTTAGTCTTCCCCCACCTCCAGTGAGCCACCCAGCATATTTCTATATGGAGTACATGGATCTGTTGCTTGAGAATGTTCCAAGGATTTTGATCGTAAGAGGATATCGTAGAGACGTTGTAACTCTGTTCACATAG 2457 0.4367 MAGIGETLVLVALCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGIFRETITQVNGTAVAQPIESPSSHDLQIYGIVVTIVLCFVVFGGVKMINRVAPAFLIPVLFSLICIFLGIFVARKDHPTEGITGLSLETMKENWSSDYQKTNDAGIPETDGSVSWNFNSLVGLFFPAVTGIMAGSNRSSSLKDTQRSIPVGTLAATLVTSSLYLISVIMLGAVASREKLLTDRLLTATVAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPHVATLFTAFLCIGCVVIGNLDLITPTVTMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSMSLIGALLCIVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKASCKQLSTYIDYKNCEGVAEIVVAPNMSEGFRGIIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFVGIINDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKDSFESCKIQVFCLAEDDADAEGLKADVKKFLYDLRMQAEVFVITMMGDAQMDGGSPQDESLEAFTSAQQRIADYLTQMKSEAEKEGTPLMADGKPVVVNEKQVEKFLDTTLKLNSTILRYSRMAAVVLVSLPPPPVSHPAYFYMEYMDLLLENVPRILIVRGYRRDVVTLFT 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1227g00017 818 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 1 815 IPR004842 GO:0006811|GO:0015377|GO:0016020
Gabi1227g00017 818 NCBIfam K-Cl cotransporter 1 818 IPR004842 GO:0006811|GO:0015377|GO:0016020
Gabi1227g00017 818 FunFam Cation-chloride cotransporter 1 1 435 - -
Gabi1227g00017 818 Pfam Solute carrier family 12 619 817 IPR018491 GO:0006811|GO:0016020|GO:0022857
Gabi1227g00017 818 Pfam Solute carrier family 12 487 608 IPR018491 GO:0006811|GO:0016020|GO:0022857
Gabi1227g00017 818 Pfam Amino acid permease 2 453 IPR004841 GO:0016020|GO:0055085
Gabi1227g00017 818 Gene3D Amino acid/polyamine transporter I 1 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1227g00017 Gabi-Chr1227 146219 171748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1227g00017 1 818 Inorganic Solute Cotransporters AT1G30450 83.496 0.0 1406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1227g00017 K14427 - gmx:100795205 1506.12