Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1227g00016 ATGGGGGACGGGGACATTGAAGGCGGTGGAGAGGACGGTTTTCACTCACCGATTGGTCGTAAGTATCGCCCTGTGTTGGCAAACGATCGTGCGGTGCTCGAGATGTCTTCCATGGATCCTGGATCTTCTTCTTCTTCTTCTGTATGTGTTGATGTTAGAAAAATAAATGTGACTGCGAGTGCGAATGAGAGTTCGGATGCTAAAGGAGGGAACTCTCCTCGTCAGCTACAACCTAATGGATCCCAGCAGGAATCCAAACTGGAATTGTTCGGTTTTGATTCTCTTGTCAACATTCTTGGTCTCAAAAGCATGACCGGTGAGCAAGTTGCCCCACCATCTAGTCCTAGAGAAGGTGAGGATATTTCCATCACAGTTGGGCAGCCAAAGCCGGCTGCTCCCAAACTGGGTACAATGATGGGTGTATTCATTCCATGTATACAAAGCATTTTGGGCATCATCTACTTCATTCGTTTCTCTTGGATTGTTGGTATGGCTGGCATAGGAGAGACATTGGTGCTAGTTGCTTTATGTGGCACTTGTACTTTCCTTACCTCAATATCGTTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCATACTATCTCATAGGTCGTGCCCTTGGTCCAGAAGTTGGAGTTAGCATTGGTCTATGCTTCTTCCTTGGAAATGCAGTTGCTGGAGCACTTTATGTATTGGGAGCTGTAGAGACGTTTTTGAAAGCTGTTCCTTCTGCTGGGATTTTCAGAGAGACTATCACACAAGTTAATGGTACTGCAGTTGCGCAACCAATAGAGAGTCCAAGTTCTCATGACCTGCAAATTTATGGGATTGTTGTGACGATTGTTTTATGCTTTGTTGTATTTGGAGGAGTAAAGATGATAAATCGGGTTGCACCTGCTTTTCTCATACCTGTTTTATTCTCACTCATCTGCATATTTTTGGGAATTTTTGTGGCAAGAAAGGATCATCCTACAGAGGGAATTACTGGGTTGAGTTTGGAGACGATGAAAGAAAATTGGAGTTCAGATTATCAAAAGACTAACGATGCTGGAATTCCAGAAACTGATGGCTCTGTAAGCTGGAATTTCAATTCATTGGTAGGGCTCTTTTTCCCAGCTGTGACGGGAATAATGGCAGGTTCTAATCGATCATCCTCTTTGAAAGATACTCAGCGATCAATTCCTGTTGGAACACTAGCTGCAACTCTTGTAACTTCTTCTTTGTATCTTATTTCTGTGATAATGCTTGGCGCTGTTGCCAGCAGAGAGAAGCTTTTAACTGACAGGCTACTTACAGCTACAGTTGCCTGGCCTTTTCCTTCATTAATTAAAATCGGGATTATTCTTTCAACTATGGGTGCTGCACTTCAGAGCCTGACTGGTGCCCCACGTCTGCTTGCAGCAATAGCCAATGATGATATTTTACCTATTTTGAACTACTTTAAAGTTGCAGATGGCAGTGAGCCACATGTGGCTACCCTTTTTACCGCATTCCTATGTATCGGGTGTGTCGTTATTGGGAATCTGGACCTTATCACTCCAACTGTAACCATGTTTTTTCTTTTATGTTATTCTGGGGTCAACTTATCCTGCTTCCTTCTCGATCTTCTAGATGCCCCCAGTTGGCGTCCCCGGTGGAAATTTCACCATTGGAGTATGTCGCTTATTGGAGCATTACTTTGCATAGTGATCATGTTCCTAATCTCCTGGTCATTCACTGTGGTGTCCTTGGCCCTTGCAAGCCTTATATACAAGTACGTGAGCATCAAAGGAAAGGCTGGGGACTGGGGAGATGGTTTCAAAAGTGCTTATTTCCAACTTGCACTTCGCAGCCTTCGGTCGCTAGGAGCAAGCCAAGTGCACCCAAAGAATTGGTATCCAATTCCACTGGTATTTTGCCGACCCTGGGGCAAACTGCCGGAAAATGTTCCCTGTCATCCCAAACTCGCAGATTTCGCCAACTGTATGAAGAAGAAAGGTCGAGGAATGTCCATATTTGTCTCTATACTAGATGGGGATTACCATGAATGTGCTGAAGATGCCAAGGCTTCTTGTAAACAACTTAGTACCTACATTGATTACAAGAATTGTGAAGGTGTGGCTGAGATTGTTGTAGCCCCGAACATGTCTGAAGGCTTTCGTGGCATCATTCAGACAATGGGCCTTGGCAATCTCAAGCCTAACATTGTGGTGATGCGTTACCCAGAAATCTGGCGTCGGGAGAATTTAACGGAAATCCCCGCCACCTTTGTTGGGATAATTAATGACTGCATTGTTGCAAACAAGGCAGTAGTTATAGTGAAGGGTCTTGATGAATGGCCTAATGAGTACCAGAAGCAGTATGGTACAATTGATTTGTATTGGATTGTGAGAGATGGTGGTCTCATGCTCCTCCTCTCTCAACTGCTGCTTACCAAGGACAGCTTTGAGAGTTGCAAGATTCAGGTCTTCTGTCTCGCAGAAGATGATGCAGATGCAGAGGGGCTGAAAGCTGATGTGAAAAAATTCCTTTATGATCTTCGGATGCAAGCGGAAGTCTTTGTCATAACAATGATGGGGGATGCACAAATGGACGGTGGTTCTCCGCAAGATGAGTCATTAGAAGCATTTACTAGTGCCCAACAAAGAATTGCTGATTATTTAACCCAAATGAAGTCAGAAGCAGAGAAAGAAGGTACTCCTCTAATGGCTGATGGTAAGCCTGTGGTTGTGAACGAGAAGCAGGTTGAGAAGTTTCTTGACACAACGCTTAAGCTTAATTCAACAATTTTGAGATACTCAAGAATGGCTGCTGTTGTTTTGGTTAGTCTTCCCCCACCTCCAGTGAGCCACCCAGCATATTTCTATATGGAGTACATGGATCTGTTGCTTGAGAATGTTCCAAGGATTTTGATCGTAAGAGGATATCGTAGAGACGTTGTAACTCTGTTCACATAG 2946 0.4426 MGDGDIEGGGEDGFHSPIGRKYRPVLANDRAVLEMSSMDPGSSSSSSVCVDVRKINVTASANESSDAKGGNSPRQLQPNGSQQESKLELFGFDSLVNILGLKSMTGEQVAPPSSPREGEDISITVGQPKPAAPKLGTMMGVFIPCIQSILGIIYFIRFSWIVGMAGIGETLVLVALCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGIFRETITQVNGTAVAQPIESPSSHDLQIYGIVVTIVLCFVVFGGVKMINRVAPAFLIPVLFSLICIFLGIFVARKDHPTEGITGLSLETMKENWSSDYQKTNDAGIPETDGSVSWNFNSLVGLFFPAVTGIMAGSNRSSSLKDTQRSIPVGTLAATLVTSSLYLISVIMLGAVASREKLLTDRLLTATVAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPHVATLFTAFLCIGCVVIGNLDLITPTVTMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSMSLIGALLCIVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKASCKQLSTYIDYKNCEGVAEIVVAPNMSEGFRGIIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFVGIINDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKDSFESCKIQVFCLAEDDADAEGLKADVKKFLYDLRMQAEVFVITMMGDAQMDGGSPQDESLEAFTSAQQRIADYLTQMKSEAEKEGTPLMADGKPVVVNEKQVEKFLDTTLKLNSTILRYSRMAAVVLVSLPPPPVSHPAYFYMEYMDLLLENVPRILIVRGYRRDVVTLFT 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1227g00016 981 MobiDBLite consensus disorder prediction 1 21 - -
Gabi1227g00016 981 MobiDBLite consensus disorder prediction 60 83 - -
Gabi1227g00016 981 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 85 978 IPR004842 GO:0006811|GO:0015377|GO:0016020
Gabi1227g00016 981 FunFam Cation-chloride cotransporter 1 134 598 - -
Gabi1227g00016 981 Pfam Amino acid permease 140 616 IPR004841 GO:0016020|GO:0055085
Gabi1227g00016 981 Pfam Solute carrier family 12 782 980 IPR018491 GO:0006811|GO:0016020|GO:0022857
Gabi1227g00016 981 Pfam Solute carrier family 12 650 771 IPR018491 GO:0006811|GO:0016020|GO:0022857
Gabi1227g00016 981 NCBIfam K-Cl cotransporter 77 981 IPR004842 GO:0006811|GO:0015377|GO:0016020
Gabi1227g00016 981 Gene3D Amino acid/polyamine transporter I 133 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1227g00016 Gabi-Chr1227 146219 173411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1227g00016 135 981 Inorganic Solute Cotransporters AT1G30450 83.353 0.0 1461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1227g00016 K14427 - gmx:100795205 1718.75