Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1227g00015 ATGGGGGACGGGGACATTGAAGGCGGTGGAGAGGACGGTTTTCACTCACCGATTGGTCGTAAGTATCGCCCTGTGTTGGCAAACGATCGTGCGGTGCTCGAGATGTCTTCCATGGATCCTGGATCTTCTTCTTCTTCTTCAAAAATAAATGTGACTGCGAGTGCGAATGAGAGTTCGGATGCTAAAGGAGGGAACTCTCCTCGTCAGCTACAACCTAATGGATCCCAGCAGGAATCCAAACTGGAATTGTTCGGTTTTGATTCTCTTGTCAACATTCTTGGTCTCAAAAGCATGACCGGTGAGCAAGTTGCCCCACCATCTAGTCCTAGAGAAGGTGAGGATATTTCCATCACAGTTGGGCAGCCAAAGCCGGCTGCTCCCAAACTGGGTACAATGATGGGTGTATTCATTCCATGTATACAAAGCATTTTGGGCATCATCTACTTCATTCGTTTCTCTTGGATTGTTGGTATGGCTGGCATAGGAGAGACATTGGTGCTAGTTGCTTTATGTGGCACTTGTACTTTCCTTACCTCAATATCGTTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCATACTATCTCATAGGTCGTGCCCTTGGTCCAGAAGTTGGAGTTAGCATTGGTCTATGCTTCTTCCTTGGAAATGCAGTTGCTGGAGCACTTTATGTATTGGGAGCTGTAGAGACGTTTTTGAAAGCTGTTCCTTCTGCTGGGATTTTCAGAGAGACTATCACACAAGTTAATGGTACTGCAGTTGCGCAACCAATAGAGAGTCCAAGTTCTCATGACCTGCAAATTTATGGGATTGTTGTGACGATTGTTTTATGCTTTGTTGTATTTGGAGGAGTAAAGATGATAAATCGGGTTGCACCTGCTTTTCTCATACCTGTTTTATTCTCACTCATCTGCATATTTTTGGGAATTTTTGTGGCAAGAAAGGATCATCCTACAGAGGGAATTACTGGGTTGAGTTTGGAGACGATGAAAGAAAATTGGAGTTCAGATTATCAAAAGACTAACGATGCTGGAATTCCAGAAACTGATGGCTCTGTAAGCTGGAATTTCAATTCATTGGTAGGGCTCTTTTTCCCAGCTGTGACGGGAATAATGGCAGGTTCTAATCGATCATCCTCTTTGAAAGATACTCAGCGATCAATTCCTGTTGGAACACTAGCTGCAACTCTTGTAACTTCTTCTTTGTATCTTATTTCTGTGATAATGCTTGGCGCTGTTGCCAGCAGAGAGAAGCTTTTAACTGACAGGCTACTTACAGCTACAGTTGCCTGGCCTTTTCCTTCATTAATTAAAATCGGGATTATTCTTTCAACTATGGGTGCTGCACTTCAGAGCCTGACTGGTGCCCCACGTCTGCTTGCAGCAATAGCCAATGATGATATTTTACCTATTTTGAACTACTTTAAAGTTGCAGATGGCAGTGAGCCACATGTGGCTACCCTTTTTACCGCATTCCTATGTATCGGGTGTGTCGTTATTGGGAATCTGGACCTTATCACTCCAACTGTAACCATGTTTTTTCTTTTATGTTATTCTGGGGTCAACTTATCCTGCTTCCTTCTCGATCTTCTAGATGCCCCCAGTTGGCGTCCCCGGTGGAAATTTCACCATTGGAGTATGTCGCTTATTGGAGCATTACTTTGCATAGTGATCATGTTCCTAATCTCCTGGTCATTCACTGTGGTGTCCTTGGCCCTTGCAAGCCTTATATACAAGTACGTGAGCATCAAAGGAAAGGCTGGGGACTGGGGAGATGGTTTCAAAAGTGCTTATTTCCAACTTGCACTTCGCAGCCTTCGGTCGCTAGGAGCAAGCCAAGTGCACCCAAAGAATTGGTATCCAATTCCACTGGTATTTTGCCGACCCTGGGGCAAACTGCCGGAAAATGTTCCCTGTCATCCCAAACTCGCAGATTTCGCCAACTGTATGAAGAAGAAAGGTCGAGGAATGTCCATATTTGTCTCTATACTAGATGGGGATTACCATGAATGTGCTGAAGATGCCAAGGCTTCTTGTAAACAACTTAGTACCTACATTGATTACAAGAATTGTGAAGGTGTGGCTGAGATTGTTGTAGCCCCGAACATGTCTGAAGGCTTTCGTGGCATCATTCAGACAATGGGCCTTGGCAATCTCAAGCCTAACATTGTGGTGATGCGTTACCCAGAAATCTGGCGTCGGGAGAATTTAACGGAAATCCCCGCCACCTTTGTTGGGATAATTAATGACTGCATTGTTGCAAACAAGGCAGTAGTTATAGTGAAGGGTCTTGATGAATGGCCTAATGAGTACCAGAAGCAGTATGGTACAATTGATTTGTATTGGATTGTGAGAGATGGTGGTCTCATGCTCCTCCTCTCTCAACTGCTGCTTACCAAGGACAGCTTTGAGAGTTGCAAGATTCAGGTCTTCTGTCTCGCAGAAGATGATGCAGATGCAGAGGGGCTGAAAGCTGATGTGAAAAAATTCCTTTATGATCTTCGGATGCAAGCGGAAGTCTTTGTCATAACAATGATGGGGGATGCACAAATGGACGGTGGTTCTCCGCAAGATGAGTCATTAGAAGCATTTACTAGTGCCCAACAAAGAATTGCTGATTATTTAACCCAAATGAAGTCAGAAGCAGAGAAAGAAGGTACTCCTCTAATGGCTGATGGTAAGCCTGTGGTTGTGAACGAGAAGCAGGTTGAGAAGTTTCTTGACACAACGCTTAAGCTTAATTCAACAATTTTGAGATACTCAAGAATGGCTGCTGTTGTTTTGGTTAGTCTTCCCCCACCTCCAGTGAGCCACCCAGCATATTTCTATATGGAGTACATGGATCTGTTGCTTGAGAATGTTCCAAGGATTTTGATCGTAAGAGGATATCGTAGAGACGTTGTAACTCTGTTCACATAG 2928 0.4433 MGDGDIEGGGEDGFHSPIGRKYRPVLANDRAVLEMSSMDPGSSSSSSKINVTASANESSDAKGGNSPRQLQPNGSQQESKLELFGFDSLVNILGLKSMTGEQVAPPSSPREGEDISITVGQPKPAAPKLGTMMGVFIPCIQSILGIIYFIRFSWIVGMAGIGETLVLVALCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGIFRETITQVNGTAVAQPIESPSSHDLQIYGIVVTIVLCFVVFGGVKMINRVAPAFLIPVLFSLICIFLGIFVARKDHPTEGITGLSLETMKENWSSDYQKTNDAGIPETDGSVSWNFNSLVGLFFPAVTGIMAGSNRSSSLKDTQRSIPVGTLAATLVTSSLYLISVIMLGAVASREKLLTDRLLTATVAWPFPSLIKIGIILSTMGAALQSLTGAPRLLAAIANDDILPILNYFKVADGSEPHVATLFTAFLCIGCVVIGNLDLITPTVTMFFLLCYSGVNLSCFLLDLLDAPSWRPRWKFHHWSMSLIGALLCIVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHECAEDAKASCKQLSTYIDYKNCEGVAEIVVAPNMSEGFRGIIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFVGIINDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKDSFESCKIQVFCLAEDDADAEGLKADVKKFLYDLRMQAEVFVITMMGDAQMDGGSPQDESLEAFTSAQQRIADYLTQMKSEAEKEGTPLMADGKPVVVNEKQVEKFLDTTLKLNSTILRYSRMAAVVLVSLPPPPVSHPAYFYMEYMDLLLENVPRILIVRGYRRDVVTLFT 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1227g00015 975 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 79 972 IPR004842 GO:0006811|GO:0015377|GO:0016020
Gabi1227g00015 975 Gene3D Amino acid/polyamine transporter I 127 592 - -
Gabi1227g00015 975 Pfam Amino acid permease 134 610 IPR004841 GO:0016020|GO:0055085
Gabi1227g00015 975 MobiDBLite consensus disorder prediction 1 77 - -
Gabi1227g00015 975 NCBIfam K-Cl cotransporter 71 975 IPR004842 GO:0006811|GO:0015377|GO:0016020
Gabi1227g00015 975 MobiDBLite consensus disorder prediction 37 77 - -
Gabi1227g00015 975 Pfam Solute carrier family 12 644 765 IPR018491 GO:0006811|GO:0016020|GO:0022857
Gabi1227g00015 975 Pfam Solute carrier family 12 776 974 IPR018491 GO:0006811|GO:0016020|GO:0022857
Gabi1227g00015 975 FunFam Cation-chloride cotransporter 1 128 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1227g00015 Gabi-Chr1227 146219 173411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1227g00015 129 975 Inorganic Solute Cotransporters AT1G30450 83.353 0.0 1462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1227g00015 K14427 - gmx:100795205 1715.66