Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1225g00024 ATGGCAGCTCGCAGAATTTCCTGGCTGCTTTCTCGCTCTCTATCTGCTTCTTTGCTTCATTCACTAGGAAGAAACTCTGGAGGGTGGAGAAACATTAACAGATTTAGCACGGCTGCAGCAGTTGAGGAATTAATCACTCCACAGGTTCAAATAAGTTATACACATAATCTGATAAATGGGCAATTTGTGGATGCTGCATCAGGGAAAACATTTCCAACATATGACCCGCGCACCGGAGAAGTGCTTGCACATGTTGCTGAAAGCGAAGCTGAAGATATCAACCGTGCAGTATCAGCAGCTCGCAAGGCCTTTGATGAAGGACCTTGGCCAAAAATGACTGCTTATGAAAGAAGTCGGATAATGCTGCGCTTTGCTGATTTAGTTGAGAAGCACAACGATGAGCTTGCAGCTCTGGAGACATGGAACAATGGAAAGCCTTATGAACAGGCTGCCAAGACTGAATTACCAATGTTTGTGCGTTTATTTCACTATTATGCTGGCTGGGCAGATAAAATTCATGGGCTGACAGTCCCAGCTGATGGCAATTATCACCTCCAGACATTGCATGAACCAATTGGAGTTGCAGGACAAATTATACCTTGGAACTTTCCTCTACTTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGCAATACCATTGTCCTGAAGACAGCTGAGCAAACGCCACTGACTGCTCTCTATGTGGCAAAACTATTTCATGAGGCTGGCCTTCCCCCAGGTGTTCTGAATATAGTTAATGGGTATGGTCCAACTGCTGGTGCACCTCTTGCAAGTCATATGGATGTGGACAAGCTAGCATTCACTGGGTCAACAGATACTGGAAAAATTGTACTTGAATTGGCTGCAAGAAGCAATCTTAAGCCAGTGACATTGGAGCTTGGAGGGAAATCACCTTTCATAATATGTGAGGATGCTGATGTTGACAAGGCTGTTGAAGCTGCACACTTTGCTCTATTCTTTAATCAGGGGCAATGTTGCTGTGCCGGGTCTCGTACCTTTGTGCATGAGCGTATCTATGACGAGTTCTTGGAGAAATCAAAGAAACGGGCTTTGAGACGTGTAGTTGGTGATCCATTCAAGAAGGGTGTTGAACAAGGTCCTCAGATTGACGTGGAACAATTTGAGAAAGTCCTTAGGTACATTAGGTCTGGAATTGAAAGCAATGCTACCCTTGAATGTGGGGGTGGGAGATTGGGCTCAAAAGGCTTCTTTGTGGAGCCAACTGTCTTCTCAAATGTTCAGGATAATATGCTGATAGCACAAGATGAAATCTTTGGCCCGGTACAGTCCATCTTGAAATTCAAGGACATTAATGAAGTAATACGACGGGCAAATGCAACACGTTATGGTCTAGCCGCAGGTGTGTTCACTAAGAACGTGAGCACAGCCAACACTTTGATGAGGGCACTGAGAGCAGGAACAGTGTGGATTAATTGCTTCGATGTTTTTGATGCTGCAATTCCTTTTGGTGGGTACAAGATGAGCGGCATAGGCAGGGAGAAAGGAATCTACAGTCTTCACAACTACCTTCAGGTGAAAGCTGTTGTCTCACCAGTCAACAATCCTGCATGGCTGTAA 1605 0.4498 MAARRISWLLSRSLSASLLHSLGRNSGGWRNINRFSTAAAVEELITPQVQISYTHNLINGQFVDAASGKTFPTYDPRTGEVLAHVAESEAEDINRAVSAARKAFDEGPWPKMTAYERSRIMLRFADLVEKHNDELAALETWNNGKPYEQAAKTELPMFVRLFHYYAGWADKIHGLTVPADGNYHLQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTALYVAKLFHEAGLPPGVLNIVNGYGPTAGAPLASHMDVDKLAFTGSTDTGKIVLELAARSNLKPVTLELGGKSPFIICEDADVDKAVEAAHFALFFNQGQCCCAGSRTFVHERIYDEFLEKSKKRALRRVVGDPFKKGVEQGPQIDVEQFEKVLRYIRSGIESNATLECGGGRLGSKGFFVEPTVFSNVQDNMLIAQDEIFGPVQSILKFKDINEVIRRANATRYGLAAGVFTKNVSTANTLMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVSPVNNPAWL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1225g00024 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 68 524 IPR016162 GO:0016491
Gabi1225g00024 534 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 300 307 IPR029510 GO:0016491
Gabi1225g00024 534 FunFam Aldehyde dehydrogenase, putative 496 522 - -
Gabi1225g00024 534 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 39 524 - -
Gabi1225g00024 534 Pfam Aldehyde dehydrogenase family 62 524 IPR015590 GO:0016491
Gabi1225g00024 534 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 328 339 IPR016160 GO:0016491
Gabi1225g00024 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 306 495 IPR016163 GO:0016620
Gabi1225g00024 534 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 58 312 - -
Gabi1225g00024 534 FunFam Mitochondrial aldehyde dehydrogenase 2 306 495 - -
Gabi1225g00024 534 CDD ALDH_F2BC 51 525 - -
Gabi1225g00024 534 SUPERFAMILY ALDH-like 49 528 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1225g00024 Gabi-Chr1225 207745 211854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1225g00024 1 534 Aldehyde Dehydrogenase Gene Family AT3G48000 78.996 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1225g00024 K00128 - qsa:O6P43_030889 954.896