Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1222g00022 ATGCCAAGAAAAGGAATGAGAAGCATCTTCTTCAAACAATCACCTCCTCCACCCACATCATCACTCCCACCTTTAATTGACGAAAACATCAAAACCGCAGAGTCTCTCATAACCAAATGGGATTATTCCACACCCAACCAATCCATAATCACTCCTCTTTTTAGCGGCACACGCGACGAAGCCAAACAGTACCTTAACGCCGTCAAGGGACTACAATCCGCTATGCAGAACCTGGCCGCACACGATCCCACCTCCAACACCCTTGTTAGAGCACATTTGTTGATGCAAGTCGCAATGAAGACGCTCGAGAAAGAGTTCTACCAGATATTATCCGCAAACAGAGATCACTTGGATCCCGAAACCGTCTCCAACCGTTCCTCCACCGATCGCGGAAGCAGCGTTTCTGATTTCGACGACGAATTCTCCGAGGACGAGTTTCGCGTTTCCGAAACGGAGAGGGTTTCCATGCTCGCCATGGCGGATTTGAAGGCAATTGCGGAATCCATGATTTTTTCCGGCTACGGAAAAGAGTGCGTCAAGGTTTACATCACCATGAGAAAATCGATCGTGGACGAGGCACTGTATCATCTTGGAGTAGAACGGTTGAGCTTCTCTCAGGTCCAGAAGATGGACTCGAAAGTGCTCGAGTTGAAAATTAAGAGCTGGTTGAACGCCGTCAAAGTCGCCGTCGGGACTCTGTTTAACGGCGAGAGAATCCTCTGCGATCACGTCTTCGCTGCGGCTTCGGAGAAGAGAATCGCGGAGTCTTGCTTCGCCGAGATTACAAAAGATGGCGCCGCGTCGCTGTTTGGATTCCCGGAAATGGTGGCAAAGTGCAAGAAAACGCCAGAGAAAATGTTCAGGACTCTGGATTTGTACGAAGCAATTTCCGACAACTGGCTACAAATTGAATCAATCTTCTCGTTCGAATCAACCTCAAATGTTCGCTCACAAGCAGTTACGTCTCAGGTGAAGCTCGGCGAGGCCGTTCGGATGATGTTATCTGACTTCGAATCGGCGATTCAGAAGGACACCTCCAAGACGGCGTTGCCAGGCGGTGGGGTCCACCCTCTCACGCGCTACGTGATGAACTACATCACTTTCCTCGCCGATTACAGCGGCATACTCGCTGACATCGTCGCTGATTGTCCGCAATCTCCGTTGCCGGAGTCTTACTATCGCAGCCCGACGCACGAGGAAAATCCGTCTTCGTCCGATATATCGGAGAAGATCGCGTGGCTTATACTCGTCGTGCTCTGCAAGCTTGATGGAAAAGCAGAACTCTACAAGGACATAGCGCTTTCCTACTTGTTCCTTGCCAATAACATGCAATACGTCGTCGTTAAGGTCCGCAAATCCAACCTAGGGTTCGTTCTCGGAGAGGATTGGTTGGCGACGCACGAATTGAAGGTTAGAGAGTACGTTTCCAAGTATGAGCGCCTAGGGTGGAGCTCCGTGTTGTCGTCGCTGCCGGAAAATCCCAAGGCGGAGTTGCCGGCGGAACAAGCCAGGGCTTGCTTCGTTAGCTTCAACGCAGCGTTTCATGAAGTTTGCAGGAAACAGTCCTCGTGGACCGTATCCGACTCGAAACTGCGAGACCAAATCAAAGTCTCGATAGCTTCGAAACTGGTTCCCAAGTACAGTGAATTCTACGAGAAGAATCGGGTCGGGTCGGATCAAGTTGTAAGAGTTTTACCCGATGAAATAGGGAATAATTTGTCTGACATTTTGTATGGGATTGGAGATTCGGGTAGCGTCTCGTCACATTCTTCGTCGACGACGTCGTCTCCGCGTCGCTCCAATCGCCGGTGA 1812 0.5044 MPRKGMRSIFFKQSPPPPTSSLPPLIDENIKTAESLITKWDYSTPNQSIITPLFSGTRDEAKQYLNAVKGLQSAMQNLAAHDPTSNTLVRAHLLMQVAMKTLEKEFYQILSANRDHLDPETVSNRSSTDRGSSVSDFDDEFSEDEFRVSETERVSMLAMADLKAIAESMIFSGYGKECVKVYITMRKSIVDEALYHLGVERLSFSQVQKMDSKVLELKIKSWLNAVKVAVGTLFNGERILCDHVFAAASEKRIAESCFAEITKDGAASLFGFPEMVAKCKKTPEKMFRTLDLYEAISDNWLQIESIFSFESTSNVRSQAVTSQVKLGEAVRMMLSDFESAIQKDTSKTALPGGGVHPLTRYVMNYITFLADYSGILADIVADCPQSPLPESYYRSPTHEENPSSSDISEKIAWLILVVLCKLDGKAELYKDIALSYLFLANNMQYVVVKVRKSNLGFVLGEDWLATHELKVREYVSKYERLGWSSVLSSLPENPKAELPAEQARACFVSFNAAFHEVCRKQSSWTVSDSKLRDQIKVSIASKLVPKYSEFYEKNRVGSDQVVRVLPDEIGNNLSDILYGIGDSGSVSSHSSSTTSSPRRSNRR 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1222g00022 603 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 570 IPR004140 GO:0000145|GO:0006887
Gabi1222g00022 603 MobiDBLite consensus disorder prediction 118 138 - -
Gabi1222g00022 603 MobiDBLite consensus disorder prediction 584 603 - -
Gabi1222g00022 603 MobiDBLite consensus disorder prediction 1 22 - -
Gabi1222g00022 603 FunFam Exocyst subunit Exo70 family protein 48 585 - -
Gabi1222g00022 603 Pfam Exo70 exocyst complex subunit 220 574 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gabi1222g00022 603 SUPERFAMILY Cullin repeat-like 58 575 IPR016159 -
Gabi1222g00022 603 Gene3D Exocyst complex component Exo70 35 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1222g00022 Gabi-Chr1222 205931 207876 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1222g00022 10 579 EXO70 exocyst subunit family AT5G59730 49.583 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1222g00022 K07195 - gmx:100810579 870.152