Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1222g00007 ATGTGGGATTGTAGAGAACTTGGCTTATTTATCTTTGCCTTATCAATCTTTCCCTTGGTATGTTTTTCTGCCAGCTTTGTTCCTATAGACAATTACCTTATAGATTGTGGAGCATCTTCCAATACTTCAATAGGTAGCAGCAATTTCACAGCTGATAGTTTCTTCAAGAATTTCCTTTCCACTAAACAAGATATTCTTGCCAATACTACTTCCTCTAATGATTTGCCACTCTATCAAACGGCAAGAATTTTCACTGCATCCTCAAAGTACACATTTCCTATTAACAAAAAGGGGAGACATTGGATCCGTCTTTATTTCTTTCCATTTGCATATGAAAATTACAATTTGGGTGCTGCAAATTTTGCTGTTACCACCCAAAACAACATCCTTCTCAGTAACTTCAGTGTGCAGAAAAATCCTGTAATGAAGGAGTATTCTGTTAATGTGACCTCAGATACACTTGTGATCACCTTTACCCCTTCCAGCAGCAATTCCATTGCTTTTGTGAATGCCATTGAAGTTGTTTCAGTCCCTGATGACCTCATTATTGATGGTGCTAACACCGTAAATCCACCAGCAAGCTACTCTGGGTTGTTGACACAGGCATTGGAGACAGTTTTCAGGGTTAACATGGGTGGTCCAACTGTGTCCTCTGGCAATGACACCCTTCATCGAAATTGGGTTCCAGATCAAAGCTTCCTTATACAACCTAACCTTGCCAGTTATGTTTCCAACATTGGTGCTGTTAAATATGTAGGTGTTTTAACAGAAAATACTGCTCCACCTACTGTCTATGGTACTCTAACACAGATGAACTCAAGTGGTGATCCCCGTAGTAATTTCAATGTGTCCTGGGAGTTTGATGTGGAACGTGGATTTCAGTACCTTGTTCGACTTCACTTCTGTGACGTAGTTAGTAAAGCTCTTAATGAACTCTACTTCAATGTTTACATTAACTCTTGGTTGGCTACTAAGGATCTTGATCTTAGTATAAAAAATAATAATGTTTTGGCTGCTCCATATTACATGGATTTGGTTACATCCCCATCTGTCAGAAATAAGATTCTTGTGAGTATTGGCCCTTCTACTCTGGATGGTGATTATCCTAATGCTATTTTGAATGGTCTTGAGATAATGAAAATGAACAACTCTATGAGCAGTCTCAGTGCATCAACAGTTGTGCCTGTGACAAGTACTTCTGGTTCGAATTCTAAGAAAGTTGGCATGATTGTGGGTGTGAGTCTTGGGGCATTTAGTGCAGTGGTCTTGCTTGGAGTTTTCTTTGTACTATGCAGGAAAAAAAGAAGGTTGGCACGACAAGCGCATTCAAAGACATGGATTCCCTTATCAGACAATGATGGAACTTCTCACAGTATGGGAAGTAAATATTCTAATGGCACAACAGCAAGTGCTGCTTCAAACTCTGGATATCGCATCCCTTTTGTGGCTGTTCAGGAGGCTACAAACAATTTTGATGAGAGTTGGGTTATTGGCATTGGTGGTTTTGGTAAAGTATACAAAGGAGAATTAAATGATGGCACTAAAGTTGCAGTTAAGAGGGGAAATCCGCGGTCACAGCAAGGGCTTGCAGAATTCAGAACTGAAATTGAAATGCTGTCTCAGTTCCGCCATCGCCATCTGGTATCATTGATTGGATATTGTGATGAAAAGAATGAAATGATCTTGATATATGAATATATGGAGAAGGGAACTCTCAAGAGTCATCTTTATGGTTCAGGTCTCCCAAGCTTGAGTTGGAAGGAGAGACTTGAGATATGCATTGGAGCAGCTAGAGGACTTCATTACCTTCACACTGGCTATGCTAAAGCAGTTATTCACCGCGATGTTAAGTCTGCAAATATCTTGCTTGATGAGAACCTAATGGCCAAAGTTGCTGATTTTGGACTATCAAAGACTGGTCCTGAAATTGATCAGACTCATGTGAGCACTGCTGTCAAAGGGAGTTTTGGTTACCTTGATCCTGAGTATTTCAGGAGGCAACAGTTAACAGAAAAGTCAGATGTGTATTCATTTGGGGTAGTTCTGTTTGAGGTTCTTTGTGCAAGACCTGTTATAGATCCATCCCTTCCTAGAGAAATGGTGAACTTGGCTGAATGGACAATGAAATGGCAGAAAAGAGGGCAATTGGAGCAAATCATAGATCCAACACTTGCAGGGAAAATAAGACCAGATTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGATTTTGGTGTTGATAGGCCTTCTATGGGAGATGTCTTGTGGAATTTGGAGTATGCTCTCCAACTTCAAGAGGCTGTTGTTCAAGGTGATCCTGAAGAAAACAGTACCAATATGATTGGTGAACTCTCTCCACAGATCAACAATTTCAACCATGAAGCAAGTGTTTCTGCAGCACAATTTGAAGCTTCAAGTCTAGATGATCTGTCTGGTGTTTCTATGAGTAAGGTATTCTCACAGCTGGTGAAATCTGAAGGGAGGTGA 2496 0.4038 MWDCRELGLFIFALSIFPLVCFSASFVPIDNYLIDCGASSNTSIGSSNFTADSFFKNFLSTKQDILANTTSSNDLPLYQTARIFTASSKYTFPINKKGRHWIRLYFFPFAYENYNLGAANFAVTTQNNILLSNFSVQKNPVMKEYSVNVTSDTLVITFTPSSSNSIAFVNAIEVVSVPDDLIIDGANTVNPPASYSGLLTQALETVFRVNMGGPTVSSGNDTLHRNWVPDQSFLIQPNLASYVSNIGAVKYVGVLTENTAPPTVYGTLTQMNSSGDPRSNFNVSWEFDVERGFQYLVRLHFCDVVSKALNELYFNVYINSWLATKDLDLSIKNNNVLAAPYYMDLVTSPSVRNKILVSIGPSTLDGDYPNAILNGLEIMKMNNSMSSLSASTVVPVTSTSGSNSKKVGMIVGVSLGAFSAVVLLGVFFVLCRKKRRLARQAHSKTWIPLSDNDGTSHSMGSKYSNGTTASAASNSGYRIPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMEKGTLKSHLYGSGLPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWTMKWQKRGQLEQIIDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQINNFNHEASVSAAQFEASSLDDLSGVSMSKVFSQLVKSEGR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1222g00007 831 FunFam Receptor-like protein kinase FERONIA 202 383 - -
Gabi1222g00007 831 Gene3D Transferase(Phosphotransferase) domain 1 567 784 - -
Gabi1222g00007 831 FunFam receptor-like protein kinase FERONIA 455 566 - -
Gabi1222g00007 831 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Gabi1222g00007 831 FunFam Receptor-like protein kinase FERONIA 567 782 - -
Gabi1222g00007 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Gabi1222g00007 831 SMART serkin_6 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1222g00007 831 Gene3D - 201 383 - -
Gabi1222g00007 831 Gene3D - 31 178 - -
Gabi1222g00007 831 Gene3D Phosphorylase Kinase; domain 1 453 566 - -
Gabi1222g00007 831 Pfam Malectin-like domain 34 381 IPR024788 -
Gabi1222g00007 831 CDD STKc_IRAK 497 762 - -
Gabi1222g00007 831 PANTHER OS07G0166700 PROTEIN 478 768 IPR045272 GO:0004714|GO:0006468
Gabi1222g00007 831 ProSiteProfiles Protein kinase domain profile. 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1222g00007 831 SUPERFAMILY Protein kinase-like (PK-like) 469 762 IPR011009 -
Gabi1222g00007 831 Pfam Protein tyrosine and serine/threonine kinase 496 688 IPR001245 GO:0004672|GO:0006468
Gabi1222g00007 831 FunFam Putative receptor-like protein kinase 31 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1222g00007 Gabi-Chr1222 43407 46810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1222g00007 10 831 Receptor kinase-like Gene Family AT3G46290 66.867 0.0 1122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi1222g00007 Malectin_like 1.3e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1222g00007 - - gmx:100806488 1414.44