Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1222g00001 ATGGGGTCCCCGAGTTCGCTGGCGAGTTACGAGAGTCAACGAGCCAGCTTAATGCAGAGGAGCGTTAGCAGCCATTCGCTGCAGAAGAATAATGGGGTCCACCATCCCTTTTCTCCTCTGTTTGCTGAGTTGCTCGACTCGGAGAACGGTCCGGTTCGCAGAGTTTACAGTACTGGTGATCTGCAGAGGATTAATGGAATGCAACATTATCATCAGTCAGATAGTCCTTTGTCAAGTGAAAGTAGTATGATCATAGAAGGAATGAACAGAACCAGTCCTTATAGCCCAGAGGAGAAGAAGGTGAGGATTGAGAGATACAGAAGCAAGAGAAACCAGAGGAACTTCACCAAGAAAATTAAGTATGCTTGTAGGAAGACATTGGCAGACAGCAGGCCCCGTATCAGAGGACGATTTGCGAGGAATGATGAACTTGTAATGAACCCTCAAGTTCAGTGGAGTCATATTAGTACTGGAGAGGAAGAAGATGAGGAAGATGAAAATTGGAACAATTTCTTTGATTCCTTAGTTCCTGCAAAACTTGCTCAGGAGCCTGAAGGAAGTTCCTCCTTTGGTGTGTTCTATTAA 585 0.453 MGSPSSLASYESQRASLMQRSVSSHSLQKNNGVHHPFSPLFAELLDSENGPVRRVYSTGDLQRINGMQHYHQSDSPLSSESSMIIEGMNRTSPYSPEEKKVRIERYRSKRNQRNFTKKIKYACRKTLADSRPRIRGRFARNDELVMNPQVQWSHISTGEEEDEEDENWNNFFDSLVPAKLAQEPEGSSSFGVFY 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1222g00001 194 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 13 165 IPR045281 GO:0009909
Gabi1222g00001 194 Pfam CCT motif 101 141 IPR010402 GO:0005515
Gabi1222g00001 194 ProSiteProfiles CCT domain profile. 99 141 IPR010402 GO:0005515
Gabi1222g00001 194 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1222g00001 Gabi-Chr1222 398 2947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1222g00001 87 140 C2C2-CO-like Transcription Factor Family AT5G24930 50.000 1.18e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi1222g00001 CCT 9e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1222g00001 - - aprc:113859774 351.673