Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1220g00010 ATGACAATGAAGCTGATTTTGGTGGCCATTGAATTTGCATGCTTAGTTTATGGGGTCATCTCCTCTGGATCTGAGACACTGTCTGTGCTTTCTTTCTTAGAAAACGGTGCCGTCTCAGAAAAGGCTTATTCCTCACCGCAACCTTTTATGGTCAACCTCACTCTTATTGAAGGAGCTGATTCTAAAGGAGCTGTGTGTTTGGATGGAACATTGCCTGGTTACCATTTGGATCGTGGATTTGGATCTGGTGCAAATAGTTGGCTTATTCATCTGGAGGGAGGAGGATGGTGTAATACCGTCAGAAACTGTGTCTATAGAAGAAGTACTCGTCGTGGTTCCTCAAAATACATGGAAAGTCAAATACCATTCACGGGAATATTGAGCAATAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTCAAATTACGGTACTGTGATGGGGCTTCTTTCAGCGGAGATAGTCAAAATGAGTCTGCACAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATAGAGGAATTAATGTCCGAAGGAATGCAGAACGCCAACCAGGCCCTTCTCTCTGGATGCTCTGCGGGTGGTCTGGCATCCATAATACATTGTGATGAGTTCCAGACCTTGTTTCCAAATTCTTCCAAAGTGAAATGTTTGAGTGATGCAGGGTTTTTTCTTGATGCAATTGATGTATCAGGGGGACGCACACTGAGGAATCTGTTTGGAGGTGTTGTTCAGTTACAGGAAGTACAAAAAAATCTGCCAAAAAGTTGTCTCAACCAACTGGACCCAACTTCGTGCTTCTTTCCTCAGAATTTGGTCAAACATGTTGAGACCCCATTGTTTCTACTCAATGCGGCTTATGATGCATGGCAGGTCCAAGCCAGTTTAGCCCCACCTTCAGCTGACCCCCTTGGCTCTTGGAGTGATTGCAAATCAAACCATGCAAATTGTAGCTCATCTCAAATTCATTTCCTCCAAGACTTCAGAAATCAATTGCTAAATGACGTGAAAGACTTCTCAATGTCATCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAGGAGACATGGTTTGCTAATGACTCTCCCCTTATTGGGAACAAGCCGATTGCAATTGCTGTTGGAGACTGGTATTTCGATCGAGAAGTTGTCAAAGCTATTGACTGTGCTTACCCCTGTGACAATACCTGCCATAATCTGATGTTTAAGTGA 1245 0.4297 MTMKLILVAIEFACLVYGVISSGSETLSVLSFLENGAVSEKAYSSPQPFMVNLTLIEGADSKGAVCLDGTLPGYHLDRGFGSGANSWLIHLEGGGWCNTVRNCVYRRSTRRGSSKYMESQIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDSQNESAQLQFRGQKIWLAAIEELMSEGMQNANQALLSGCSAGGLASIIHCDEFQTLFPNSSKVKCLSDAGFFLDAIDVSGGRTLRNLFGGVVQLQEVQKNLPKSCLNQLDPTSCFFPQNLVKHVETPLFLLNAAYDAWQVQASLAPPSADPLGSWSDCKSNHANCSSSQIHFLQDFRNQLLNDVKDFSMSSQTGLFINSCFAHCQSERQETWFANDSPLIGNKPIAIAVGDWYFDREVVKAIDCAYPCDNTCHNLMFK 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1220g00010 414 Pfam Pectinacetylesterase 46 394 IPR004963 GO:0016787
Gabi1220g00010 414 PANTHER NOTUM-RELATED 33 410 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1220g00010 Gabi-Chr1220 96799 103774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1220g00010 6 413 Carbohydrate Esterase AT3G62060 66.667 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1220g00010 K19882 - gmx:100786972 741.495