Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1220g00006 ATGGGATATCTAATTAGTGTTGCCATGGGAATCATGGGGCCACCTTACTCCCTTGTTTATGGTTCTCTCCCTGAAATCAAAACCATGATGAAGGATGCAAGGGAAAAGGTCATGGATAGTCACTCACCTGAAATCACTAAGAGGGTTCTTCCACACTACCAAAAATGGTCCTCGTTATATGGGGAGACATTTCTGTATTGGCACGGAACTAAACCAGTGATTTGCATTCCTGATCCTGAGCTGGCCAAAGAGATTTTATCAAACAAGTTTGGTTTCTATGCGAAACCCAAGACCAGGCCTTCTATAGTAACTATGATAGGAAACGGGTTAGTTCTAGTAAATGGATTGGAATGGGTTAAGCACAGAAGGATACTCAATCCTGCCTTCTCCATGGATAAACTAAAGGTCATGATTAGTAGTATGGCAGCATGCACCATTTCCATGCTGAATGAGTGGAAAAGTCAAGCCCTTGAAACCAAGGACAAATCCAAGACAATAGAGATTAAAGAAGAATTTCAAGAGCTAACAGCAGATATAATAGCTCACACTGCCTTTGGTGTCAGCTTTGTCCAAGGAAGGGAGGCCTTTGATGCACAAAGGGAAATTCAAAAGTATTGCATAGCTTCAAATGTTGACATTTTCATTCCTGGCAGCCAATATCTTCCTACTCACTCAAATTTCCAGATATGGAAGCTTGATGGGAAAATGAAGAAATCTATACAGAGCATTATAGAAAGTAGATTGCATTCTCAATCAGATTGCTCTTATGGTGACGATCTGTTGGGGTTGATGATGGATACAGCAAAAACAAAAAGTGGTCCTAAGTTGAAGATGAACGAAATCATAGAAGATTGCAAGACCTTTTTCTTTGCCGGTCATGAAACCACTTCAAACTTGCTCACTTGGGCAGTGTTCTTGTTGAGTTTACACAATGAATGGCAAGAGAAACTTAGACAAGAGGTCTTGCAGAACTGTGGCATGGAAATTCCTGATGAAGATATGTTATCAAACTTAAAAATGGTGAATATGGTATTGCTGGAAGCGTTAAGATTGTATTGCCCCGTGATAGAACTACAAAGGGAGGCTTCGGAAGACATGAAACTGGGAAATTTGTTGATACCAAAAGAAACATGTCTCGCAATCCCAATTACAATGATTCACAGGAGCAAAGAATACTGGGGTGATGATGCAAACGAGTTCAATCCACTGAGATTCATAAATGGAGTTTCTAAGGCTGCAAAGCACCCAAATGCTCTACTTGCCTATTCAATGGGTCCAAGAAATTGCATTGGTAAGAATTTTGCTATGCTGGAAGCGAAGACAGTAATGGCTTTGATTCTTCAGAGATTTTCTTGGTCCCTTTCCCCTGACTACAAACATGCACCTGTAAACAACCTTACTTTGCAGCCACAACATGGCCTTCAAATCATTGTGAAACCTTTGCAATTGTAA 1452 0.4043 MGYLISVAMGIMGPPYSLVYGSLPEIKTMMKDAREKVMDSHSPEITKRVLPHYQKWSSLYGETFLYWHGTKPVICIPDPELAKEILSNKFGFYAKPKTRPSIVTMIGNGLVLVNGLEWVKHRRILNPAFSMDKLKVMISSMAACTISMLNEWKSQALETKDKSKTIEIKEEFQELTADIIAHTAFGVSFVQGREAFDAQREIQKYCIASNVDIFIPGSQYLPTHSNFQIWKLDGKMKKSIQSIIESRLHSQSDCSYGDDLLGLMMDTAKTKSGPKLKMNEIIEDCKTFFFAGHETTSNLLTWAVFLLSLHNEWQEKLRQEVLQNCGMEIPDEDMLSNLKMVNMVLLEALRLYCPVIELQREASEDMKLGNLLIPKETCLAIPITMIHRSKEYWGDDANEFNPLRFINGVSKAAKHPNALLAYSMGPRNCIGKNFAMLEAKTVMALILQRFSWSLSPDYKHAPVNNLTLQPQHGLQIIVKPLQL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1220g00006 483 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1220g00006 483 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1220g00006 483 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1220g00006 483 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1220g00006 483 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1220g00006 483 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1220g00006 483 Gene3D Cytochrome P450 38 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1220g00006 483 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 473 - -
Gabi1220g00006 483 SUPERFAMILY Cytochrome P450 46 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1220g00006 483 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1220g00006 483 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1220g00006 483 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1220g00006 483 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1220g00006 483 Pfam Cytochrome P450 53 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1220g00006 Gabi-Chr1220 37385 41461 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1220g00006 10 482 Cytochrome P450 AT2G46960 55.324 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1220g00006 K20660 - aprc:113872106 788.489