Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1213g00019 ATGACTCGTATGCTGTTGCAGCTGCTACCTCCTTTCTTCATATTCTTCATCCTTCCGGTGCTCTTTTTCTTCTTCCTCAAACCATCTTCTCTGAAGGAGAAGAAGGAGAAAGGTCCTTCACCCACCGTTACACTCCCAAAAGCATACCCACTGATTGGTTCCTACTTAGCCATCAAAGCACAAGGCAAACGCCGTTTGCAATGGTTATCCGATATTGTCCAAATCTCCCCAACCGCCACCTTCACCCTCCGCCGCCACTTGGGCCATCGACAAGTCATCACCGGCAACCCCGCCACCGTACAGCACATTCTCAAGACCCATTTCTCCACTTACGAAAAGGGAAACAGCCTTCGACAAACCCTCTCTGATTTTCTTGGCAACGGAATCTTCAACGCCGACGGGGATAACTGGAAGTTTCAAAGGCAAGTTGCCAGCCACGAATTCAACACAAAGTCTCTGCGGAAATTCGTCGAACATGTGGTGGACGCCGAGCTCTCCGACCGCCTCGTCCCCATTCTCGCTTCAGCGGCAGCAGCCCAAGACCAAACTCTCGATTTCCAAGACATCCTTCAACGTTTCGCGTTCGACAACATCTGCAAGATCGCTTTTGGGTTCGACCCAGAATATCTAGCGCTGTCCGTTGAGCGGAGCAAGTTCGCGCAAGCCTTCGAAGAAGCAACAGAGATCAGCAGCAAACGGTTCCGCGAACCGTTACCCATAATATGGAAAATAAAGAGAAAACTCGACATAGGATCGGAAAAGAGACTGCGAATCGCAGTCTCGGAAGTGCGAGAATTTGCCAAGAACATAGTGAGAGAGAAGAAGCGCGAGCTGAAGGAGAAGGCCTCACTTGAATCTGTTGACATGTTGTCGCGGTTCTTGAGTTCGGGTCACTCCGACGAGGACTTCGTGACGGACATAGTCATAAGCTTCATATTGGCCGGAAAAGACACGACGTCGGCGGCGCTCACGTGGTTTTTCTGGCTGCTGTCGAAGAACCCGCGGGTGGAGAACGAGGTTGTGAAAGAAATCGGAGAAAAATCAGAAGAGCCGGTTTACGATGAAGTGAAGGACATGGTTTACACACACGCTGCGTTGTGTGAGAGCATGAGGCTGTACCCGCCAGTGCCTATAGACACCAAGGAAGCAGTTGTGGACGACGTTTTGCCGGATGGGACGGTGGTGAAGAAGGGGACGATGGTGTCGTATCACGTGTACGCGATGGGGAGGATGGAGAGTGTTTGGGGTAATGATTGGGCTGAGTTTAGGCCTGAGAGGTGGTTAGAGAAGGTTGATTCTGGTAAGTGGAGTTTCGTTGGGAGGGATCCTTACAGCTATCCCGTGTTTCAGGCGGGTCCCAGGATTTGTTTGGGGAAGGAAATGGCGTTTATGCAGATGAAGAGGGTAGTGGCTGGCGTTCTTAGGCGGTTCAAGGTGGTGCCGGCGGTGGCCGAAGGGGTGGTGCCCAACTTCATTTACTTCTTGACGTCCCAAATGGAAGGTGGGTTCCCGGTGAGGATCCAGAAAAGGGTTGGTTGA 1539 0.5172 MTRMLLQLLPPFFIFFILPVLFFFFLKPSSLKEKKEKGPSPTVTLPKAYPLIGSYLAIKAQGKRRLQWLSDIVQISPTATFTLRRHLGHRQVITGNPATVQHILKTHFSTYEKGNSLRQTLSDFLGNGIFNADGDNWKFQRQVASHEFNTKSLRKFVEHVVDAELSDRLVPILASAAAAQDQTLDFQDILQRFAFDNICKIAFGFDPEYLALSVERSKFAQAFEEATEISSKRFREPLPIIWKIKRKLDIGSEKRLRIAVSEVREFAKNIVREKKRELKEKASLESVDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLSKNPRVENEVVKEIGEKSEEPVYDEVKDMVYTHAALCESMRLYPPVPIDTKEAVVDDVLPDGTVVKKGTMVSYHVYAMGRMESVWGNDWAEFRPERWLEKVDSGKWSFVGRDPYSYPVFQAGPRICLGKEMAFMQMKRVVAGVLRRFKVVPAVAEGVVPNFIYFLTSQMEGGFPVRIQKRVG 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1213g00019 512 SUPERFAMILY Cytochrome P450 46 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1213g00019 512 Gene3D Cytochrome P450 30 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1213g00019 512 Pfam Cytochrome P450 46 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1213g00019 512 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1213g00019 512 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1213g00019 512 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1213g00019 512 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1213g00019 512 CDD CYP86A 80 503 - -
Gabi1213g00019 512 PANTHER CYTOCHROME P450 29 505 - -
Gabi1213g00019 512 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1213g00019 512 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1213g00019 512 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1213g00019 512 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1213g00019 512 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1213g00019 Gabi-Chr1213 186755 188431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1213g00019 14 510 Cytochrome P450 AT5G63450 46.507 6.20e-154 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1213g00019 K20769 K13407 gmx:100817669 796.964