Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi1213g00010 | ATGGACTTGAGCTACCCGCCTGAAGAGTCGTATTCCAAGAGCTCCAGCGAAGAAACTGATCGATCATCTGAACAGAATAATGATGATACAGGAACTGGAAGATCCTATGAGTGTATCTTTTGCAAGAGAGGCTTCAACACAGCACAAGCTTTAGGTGGACACATGAACATACACAGAAAGGATAGAGTCAACAAAACCAAACCCAGTTTCCCTCCTTCAAGTTCAAACAAAGTTGATGACAACAACAACTATGCAGATCTAGGGTTCTATTCAGACTCTCCAAGCCATCCTGCTCCTGATGCTAGAAACTACCATCAAGTTTATTCTTCTGCAACAACACATGTACAATATGGTGAGGTCTTGTGTGTAGAAAACCAACGGGAGCATCACCAGTTTGGACAAGATTGGAGGCAGAGAAATTTGAGCTTGTACACTAATCCATTATGTGTTCGTGAAATTAAAGACAAGTTTGAAGACAACAGTGTAGAGAATGATGGTATTGATTTGGAGCTGAGGCTTGGTCATCATCCATAA | 534 | 0.4157 | MDLSYPPEESYSKSSSEETDRSSEQNNDDTGTGRSYECIFCKRGFNTAQALGGHMNIHRKDRVNKTKPSFPPSSSNKVDDNNNYADLGFYSDSPSHPAPDARNYHQVYSSATTHVQYGEVLCVENQREHHQFGQDWRQRNLSLYTNPLCVREIKDKFEDNSVENDGIDLELRLGHHP | 177 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi1213g00010 | 177 | PANTHER | OS07G0101800 PROTEIN | 15 | 176 | - | - | |
Gabi1213g00010 | 177 | MobiDBLite | consensus disorder prediction | 13 | 27 | - | - | |
Gabi1213g00010 | 177 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Gabi1213g00010 | 177 | MobiDBLite | consensus disorder prediction | 67 | 87 | - | - | |
Gabi1213g00010 | 177 | Pfam | C2H2-type zinc finger | 36 | 60 | - | - | |
Gabi1213g00010 | 177 | Gene3D | Classic Zinc Finger | 10 | 91 | - | - | |
Gabi1213g00010 | 177 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 36 | 63 | IPR013087 | - | |
Gabi1213g00010 | 177 | MobiDBLite | consensus disorder prediction | 56 | 87 | - | - | |
Gabi1213g00010 | 177 | SUPERFAMILY | beta-beta-alpha zinc fingers | 34 | 63 | IPR036236 | - | |
Gabi1213g00010 | 177 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 38 | 58 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi1213g00010 | Gabi-Chr1213 | 80887 | 81521 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi1213g00010 | 36 | 174 | C2H2 Transcription Factor Family | AT5G43540 | 35.714 | 8.84e-17 | 71.2 |