Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1213g00002 ATGACTGGTTCTGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGGAAATGTGTCAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAACAGGGTGCTACCCATTTTTCTGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCACACCTCCCTGTGAGTGACCGTTGTGAAGCTGCAGTCACAATCTCATATGAAGCTCAAGCTAGACTTCAGGATCCAATTTATGGCTGTGTTGCTCATATTTTTGCACTCCAACAACAGGTTGTAAATTTACAAGCACAACTAGCTTATCTCAGGGAACAAGCATCTCAGAGCTGTCTCAATGTCTCTGCAGCTGAAAACCCTAATGAGAAATACTTTGGAAAACCTACTACTTTACCCCAAGATCTTCAATGTTGGTTCCAGATGGAGAATTCCAACGTGGGTCCTCAATTTCTTCCTAATCTGTCCACTAATCCCTCAACAACTCAATATTATGGGAATACTACTCTGATGGATCCAAACCCTATTGGAAATTATGAAAATTCAGGAACCCTGGAAGAAAGTATCTCATTTTCTAGCTTTGAAGAGAGTTGTAACTCCATGTCCTATGACATGCAAGGGCAGTGGGCTTTTCATGAAGTGGATAACCTTCAGTAA 657 0.4201 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFSAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVAHIFALQQQVVNLQAQLAYLREQASQSCLNVSAAENPNEKYFGKPTTLPQDLQCWFQMENSNVGPQFLPNLSTNPSTTQYYGNTTLMDPNPIGNYENSGTLEESISFSSFEESCNSMSYDMQGQWAFHEVDNLQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1213g00002 218 Coils Coil 87 107 - -
Gabi1213g00002 218 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Gabi1213g00002 218 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 159 - -
Gabi1213g00002 218 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1213g00002 Gabi-Chr1213 28495 29260 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1213g00002 7 204 AS2 family AT3G58190 57.426 4.27e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi1213g00002 LOB 8.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1213g00002 K13945 K13944 gmx:100816960 357.066