Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1212g00002 ATGACTTTTGATTCATTGTTTCTGAGGGAAATCGGTGTTGCACTTCTCATCTTCAGCATCTCACACCTCATCATTCGCTTACTCCTCAGAAGCAGTTATAAAAATATCCCACCAGGTCCAAAAGGATGGCCAATTCTTGGTGCTCTACCACTATTGGGGACCATGCCTCATGTCACACTCGCAAACATGGCCAAGAAATTTGGACCCATCATGTTCCTCAAAATGGGAACTTGTGACACAGTAGTTATCTCAAGCCCAGATGCAGCCAGAGCATTCCTCAAGACCTTAGACCGTAATTTCTCAAACAGGCCCACTATTGCTGGTTCAACCCATTTGGGGTACAATTCACAAGACCTAGTTTTTGCAGATTATGGGCCTAAATGGAAGCTGCTTAGGAAACTAACCAACTTGCACATGCTTGGGGCGAAGGCTCTTCAGGATTGGGAGCATGTGAGAGAAACTGAGGTAGGACACATGCTGAGAGTTATTCATGAGTTTGGTAAACAAGGGGAACCAATAGAGGTGGGAGATTTGTTGAGTTGTGCAATAACAAATATGGTGAGCCAAGTGGTACTCAGCAACCGCATATTTGCAAACAAAGGGTCAGAGTCTAAGGAGTTTAAGGACATGGTGGTGGAGTTCATGACAATATCTGGGGTTAACATTGGTGATTTTGTACCTTGTATTGCTTGGATGGACTTGCAAGGTGTGGTTGTTAAGATGAAGCGTTTGCATAAGAAGTTTGATGTGTTTTTGACTAAGATGATTGAGAAGCATGTGAAGTCTGCTCATGAGCGTAAGGACAAGCCAGATTTTTTGGATATTGTGATGGCAAATGGTGAAGATCCCTCTGAGGAGAGACTGAGTTTGTCCAACATTAAAGCTCTACTATTGAATTTGTTCACTGCAGGCACAGATACATCAACTAGCATCATAGAATGGGCACTAGCTGAAATGTTGAAAAACCCAAACATCCTAATAAGGGCACAGAAAGAGATGGAGCAAGTAATAGGCAGGCAAAGACTACTTGTTGAATCTGACCTACCTAAATTACCATACCTTCAAGCAATTTGCAAGGAGACATATCGGATGCACCCATCTACACCCCTTAGTGTTCCCAGGGTCTCAACTGAAGCATGCCAAGTTAATGGCTACTACATCCCCAAGAACACCAGGTTACTTGTCAATATATGGGCCATAGGGAGAGACACCAATGTGTGGGCCAACCCATTAGAGTTCCAGCCAGAGAGATTTTTTTGTGGAAACAATGCAAAAATTGATCCCAGTGGAGTTGATTTTGAGTTGATTCCCTTTGGAGCTGGAAGGAGGATTTGTGCAGGGTATAGAATGGCTATTGTGGTCATTGAGTACATTTTGGGCACTTTGGTGCACTCTTTTGACTGGAAGTTACCAAATGGAGTAGAGCTAAACTTGGATGAAGCATTTGGACTCACTCTGCAAAAGGCAGTGCCTCTGTCAGCTATGGTTAGCCCTCGGTTGGTCCCAGATGCTTATGTTTGA 1521 0.4366 MTFDSLFLREIGVALLIFSISHLIIRLLLRSSYKNIPPGPKGWPILGALPLLGTMPHVTLANMAKKFGPIMFLKMGTCDTVVISSPDAARAFLKTLDRNFSNRPTIAGSTHLGYNSQDLVFADYGPKWKLLRKLTNLHMLGAKALQDWEHVRETEVGHMLRVIHEFGKQGEPIEVGDLLSCAITNMVSQVVLSNRIFANKGSESKEFKDMVVEFMTISGVNIGDFVPCIAWMDLQGVVVKMKRLHKKFDVFLTKMIEKHVKSAHERKDKPDFLDIVMANGEDPSEERLSLSNIKALLLNLFTAGTDTSTSIIEWALAEMLKNPNILIRAQKEMEQVIGRQRLLVESDLPKLPYLQAICKETYRMHPSTPLSVPRVSTEACQVNGYYIPKNTRLLVNIWAIGRDTNVWANPLEFQPERFFCGNNAKIDPSGVDFELIPFGAGRRICAGYRMAIVVIEYILGTLVHSFDWKLPNGVELNLDEAFGLTLQKAVPLSAMVSPRLVPDAYV 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1212g00002 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Gabi1212g00002 506 PANTHER CYTOCHROME P450 98A9 16 503 - -
Gabi1212g00002 506 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 FunFam Flavonoid 3',5'-hydroxylase 2 28 496 - -
Gabi1212g00002 506 Gene3D Cytochrome P450 29 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 SUPERFAMILY Cytochrome P450 37 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi1212g00002 506 Pfam Cytochrome P450 37 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1212g00002 Gabi-Chr1212 42446 48335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1212g00002 13 505 Cytochrome P450 AT5G07990 46.733 2.28e-175 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1212g00002 K13083 - cave:132164054 734.947