Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1210g00010 ATGGCTTCTGAAAGGGTAAGCTCCGAAACAGTGGCGAAAGCCGTTGATTCTCTCCTGAAATGGAGGAACTCACAGTCAGAAACCCAAAAGCCGAAGCTGTTCGACGAAGACGAGGAATTCGTGTATCTGATTCTCACTCTCAAAAAGATTCCCCAAAAGGGTCGAGTTAACCCTTACAAGATCTCTCTCCCTCACTCCCTTCTCTCTCCATTCTCCGAGCAGTGCTTGATCATCGACGACAGGCCCAAGTCCCAACTCACCAAAGCCCAAGCCCATAACAAGATCCAGTCCGAGAGCATCCCCATCTCGAAGGTTCTGAAGCTCACGAAGCTCGCCTCCGATTACCGTCCCTTCGAGGCGAAGAGGAAGCTATGCAATTCTTACGACGTGTTTTTCGCTGACAAGAGGGTTGTTCCTTTGCTTCCGAGGTTGTTGGGGAAACTCTTCTTCAAGAAGAAGAAGGTTCCTGTTGCTTTGGATTTGAAGAAGAATAATTGGAAGGAACAGGTTCAGAAGGCTTGTTCTTCGGGGCTGTTGTTTCTGAGTACTGGGACTTGTAGTGTTGTTAGGGTTGCCAAGTTGAGCATGGAGAGGGATGATATCGTGTCCAATGTTGTTGCTGCCATCAATGGGATAACTGAGGTTGTTCCCATTAAATGGTCTAATGTAAGGTCCTTTCATGTCAAGTTGTTAGAGTCCCTCGCCTTGCCCGTTTATCAGACGGTTCCTGATGTGAAGTTGAAGATTGTGGGAATTAAGGAGAATGAGAGGAAAGAGCAAGAGGAAGAGGAAGAGGAGGAGGAAGCGGGTGAGAAGAAAGTGGGAAAGAAGAAGGGTAGGATTCATCAAGTTAAGTACATGGATGATAAAGTTGGTGAGGATCTCATTAAAGATGATGATGATGTTGTTGTGGAAGAAGATTCTGAGAATGATGAAAAGGGTAATGGAGAATTAGTGAATAAGAAGAGGAAGAAAGGAGTTAAAGTGGTGAAGGGGGGTCTAAGTGAGTTGACTAGTATCAAACGTTTGAAGAATTCTGCTAAGGAAAGTTTGATCAACAAAATTGGAAATAAATTATCTGTTGAGGATCTGGAGTCGGGCAACAAGAAGAAGAACAAGAAGAGAGTGGATGTTAAAGTAAAGGCTAAGAAAAGTAAGAGGGTTTTGTGA 1170 0.4453 MASERVSSETVAKAVDSLLKWRNSQSETQKPKLFDEDEEFVYLILTLKKIPQKGRVNPYKISLPHSLLSPFSEQCLIIDDRPKSQLTKAQAHNKIQSESIPISKVLKLTKLASDYRPFEAKRKLCNSYDVFFADKRVVPLLPRLLGKLFFKKKKVPVALDLKKNNWKEQVQKACSSGLLFLSTGTCSVVRVAKLSMERDDIVSNVVAAINGITEVVPIKWSNVRSFHVKLLESLALPVYQTVPDVKLKIVGIKENERKEQEEEEEEEEAGEKKVGKKKGRIHQVKYMDDKVGEDLIKDDDDVVVEEDSENDEKGNGELVNKKRKKGVKVVKGGLSELTSIKRLKNSAKESLINKIGNKLSVEDLESGNKKKNKKRVDVKVKAKKSKRVL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1210g00010 389 Gene3D - 84 176 IPR016095 -
Gabi1210g00010 389 FunFam Ribosomal protein L1p/L10e family 84 175 - -
Gabi1210g00010 389 Pfam Ribosomal protein L1p/L10e family 32 233 IPR028364 -
Gabi1210g00010 389 Coils Coil 252 273 - -
Gabi1210g00010 389 MobiDBLite consensus disorder prediction 373 389 - -
Gabi1210g00010 389 SUPERFAMILY Ribosomal protein L1 5 239 IPR023674 -
Gabi1210g00010 389 CDD Ribosomal_L1 11 238 IPR028364 -
Gabi1210g00010 389 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 13 233 - -
Gabi1210g00010 389 MobiDBLite consensus disorder prediction 365 389 - -
Gabi1210g00010 389 MobiDBLite consensus disorder prediction 256 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1210g00010 Gabi-Chr1210 176960 178567 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1210g00010 127 229 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.193 2.23e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1210g00010 K14775 - gmx:100815650 395.586