Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1209g00009 ATGACCAAGCTAGCATACCTCCATGAGCCAGGAGTTTTGCATAACCTTGCTTGTCGTTTTTCTCTCAATGAGATATATACATATACAGGAAACATCTTAATTGCAGTGAACCCTTTTAGAAGACTACCACACTTGTATGCAATCCATATGATGGAGCAGTACAAAGGAGCAGCATTTGGAGAGCTTAGCCCTCACCTTTTTGCTGTAGCAGACACCTGTTACAGGGCAATGATAAATGAAAATGGAAGTCAATCCATTTTGGTGAGTGGAGAGAGTGGAGCTGGGAAAACTGAGACAACCAAAATGCTAATGAGGTATCTAGCATTCATGGGGGGTAGATCTCGTACAGAAGGAAGAACTGTAGAACAACAGGTTTTGGAGTCCAATCCAGTGTTGGAAGCATTTGGAAATGCCAAAACTGTTAAAAACAACAATTCAAGTCGTTTTGGTAAATTTGTTGAAATTCAATTTGACAAGAATGGCAAGATTTCTGGAGCTGCAATCCGTACATATCTCCTTGAAAGGTCAAGAGTTTGCCAGGTTTCAGACCCAGAAAGAAACTATCATTGCTTTTACATGCTTTGTGCAGCACCACAAGAGGATGTCAAAAAGTACAAGTTAGGGGACCCAAGGCAATTCCACTATCTTAATCAAACAAACTGTTACGAAGTTTCAAATGTAGATGATGCTAAAGAATACTTGGAGACCAGAAATGCAATGGATATTGTTGGCATCAACCAGGATGAACAGGATGCTATCTTTCGTGTAGTAGCTGCAATCCTCCATCTTGGAAACATTGACTTTGTCAAAGGGAAAGAAGTTGATTCTTCCAAACTGAAAGATGACAAATCACTCTTCCACCTTCGAACAGTTGCAGAGTTACTCATGTGTGAAGAGAGAGCATTAGAAGACTCACTTTGCAAGCGTGTCATTGTAACTCCTGATGGTAACATTACAAAACCACTAGACCCCGAGGCAGCTGCTTTGAGCCGAGATGCTTTGGCAAAGACTGTCTACTCCAGACTTTTTGATTGGATTGTTGACAAGATTAACAGTTCAATTGGTCAAGATTCAAATGCAGTAAGCATAATAGGAGTCCTTGATATTTATGGATTTGAAAGCTTCAAAATCAATAGTTTCGAGCAACTATGCATCAACCTGACAAATGAGAAGTTGCAACAACATTTTAATCAGCATGTATTCAAGATGGAGCAGGAAGAGTACACTAAGGAGGAAATCGATTGGAGCTATGTTGAATTTGTGGATAATCAGGATGTACTTGATCTTATTGAGAAGAAACCTGGGGGAATAATTGCTCTTCTTGATGAAGCCTGCATGTTCCCCAAGTCTACTCATGAGACTTTTGCACAAAAGATGTACCAGACATATAAAGGACACAAGCGCTTCAGCAAGCCAAAACTTGCTAGAACAGACTTCACAGTTAACCACTATGCCGGAGATGTCACATACCAAGCAGATTATTTTCTTGATAAAAATAAAGATTATGTGGTAGCTGAGCATCAAGCACTTTTATGGGCTTCAAAGTGCCAATTTGTTGCTAATCTTTTCCCTCCTTTACCTGAGGAGACATCAAAGCAATCAAAATTCTCTTCCATTGGTTCACAGTTTAAGCAACAACTACAATCTCTCATGGAGACATTGAGCACAACAGAACCACATTACATAAGATGTGTGAAACCAAATTCAGTTTTGCAGCCAGGAATATTTGAGAACTTCAATGTCTTAAACCAGTTAAGATGTGGGGGAGTACTTGAGGCAATAAGGATTAGTTGTGCTGGATATCCAACAAAAAGAACATTTGAAGAGTTCCTTGATCGTTTTGGAATGCTAGCCCCTGATGTCCTTGATGGATCTGATGAGAAAAAGGCATCTATCGCCATCTGTGATAAGATGGGCTTAAAAGGCTATCAAATGGGGAAAACAAAGGTATTTCTCAGAGCTGGTCAGATGGCTGAATTAGATGCGCGGAGAGCCGAAGTCTTAGCTAAAGCAGCTAGACGCATACAGAGACAAATCCGAACACATTTAACAAGAAAAGAGTTCATCACCCTGAGAAAGGCCACAATCCTTATCCAGAAGATTTGGAGAGCAAAACTTGCTCGTAAACTCTATGAGCATATGAGGAGGGAAGCAGCTTCTATCCGAATACAGAAACATGTGCGTGCACACAGAGCAAGAATGTATTATACATCATTACAAGCATCAGCTATAATTATTCAGTCAGGGTTGAGAGCATTAGCAGCACGGAATGAATATAGGTACAGAAGAAGAACAAAGGCTTCAACCAAAATTCAGACACAATGGAGAAGAGTCCAAGCTCTTTCTGATTACAAACAGCAGAAGAGAGCAACTGTTACACTTCAATGTCTCTGGAGAGTTAAAGTAGCAAGGAAAGAGCTCAGAAAGCTTAAGATGGCTGCAAGGGAAACCGGGGCACTTAAAGAAGCAAAAGACAAATTGGAGAAGCGTGTTGAGGAGCTTACATGGAGATTAGATATTGAAAAGCACTTGAGGATTGACCTTGAAGAAGCTAAAGGACAAGAGATAGCAAAATTACAAAATGCTTTACAAGAAATGCAAGCTCAGCTAGATGAAGCCCATGCTGCAATTATACAAGAGAAAGAAGCAGCAAAAATAGCAATTGAACAAGCACCACCAGTAATTAAAGAGGTGCCTGTTGTGGACAACACCAAGCTAGGGTTACTGACAAATAAAAATGAGAAGCTGGAGAGTGAAGTAGAAGAGCTGACAAAGAAGATCCAAAAGTTTGAAGAAAGGTACTCAGAAATTGAAAACGAGACTCAAGCAAGGCTGAAAGAGGCAGAAGAAGCACAGCTTAAAGCAACACAGCTTCAGGAGACTATTGAAAGATTAGAATTGAGTTTGTCAAACCTTGAGTCTGAGAATCAGGTTCTATGCCAGCAGGCTTTGGTAGAATCAAAAAATGAAGAACTTTCTGAAGAGATCAAAACCCTCAAGGGTCGGATAGCAAATCTAGAATCAGAGAAACAATTTCTAAGGAGCCAGGCAGCAGTTGCTGTAGAGCAGAAAGTTCATCCAGAAATAATAGAAACGGACCAGGAAATTACTGTTAATTTGGATAATGGAAATCAAACTGAGGAAGAAATGCATGCAAGAAAAGAACCAAGAGCACCAGTCTCCTTTCTTACAAAACAAAGATCACTCACAGACAGGCAGCAGGAAAGTCATGATGCACTGCTCAAGTGTCTCACAGAAGATAAGCGATTTGAGAAAAACAGACCAGCAGTTGCTTGTATTGCTTACAAAGCACTTCTTCATTGGAGATCCTTTGAAGCAGAGAAGACACATATATTTGATAAAATTATTCACTCTATCCGATCATCTATAGAGAGTCAAGAAGGAATCAATGATCTAGCATATTGGCTTTCAACAACTTCAACACTTTTGTTTTATCTACAATGCACACTCAAGGCCAGCAATACAACTAAGGCAGTGTCAAGAAATCGAAACTCACCTGCCACTCTATTTGGAAAAATGGCACAAGGTTTGCGTTCATCTTCAATGGGGTTGGGGATTTCAAGTGGCTACAGTGGAATGGTGGACAAGCCTAATGAGCAATCTAAAGTGGAAGCCAAGTACCCTGCCATTCTATTTAAACAACATTTGACTGCATATGTTGAGAAGATATATGGAATGATCCGTGATAGTTTGAAGAAAGAGATTAGCCCATTCTTAAATTTGTGTATTCAGGCACCAAGATCCATAAGGACAAGATCAATAAGAGGGTCATCCAGAAACATCCATTCAAATATAGTAGCAAAACAACAGGCATTGCATATGCACTGGAAAAGCATTGTCAACAAGTTAGATCATGTCTTGGGTATACTGTCTGATAACTATGTCCCTCCAATAATAACAAGGAAGATAATTAGTCAGGTTTTCTCATTCATGAATGTCCAACTCTTTAATAGTTTGTTGCTTCGTCGTGAGTGCTGCTCCTTTAGCAATGGAGAGTATTTGAAGGCAGGTTTGCATGAGTTGGAATTATGGTGTCTTAAAGCAACAGATCAGTTTGCTGGGTCATCATGGGATGAACTCAAACACATACGCCAAGCTGTGGGATTTCTGGTTTTGCATCAAAAGACTCAAAAATCTTTGGATGAGATCACAAATGAACTCTGCCCGGTGTTAAGTATTCCACAAATATATCGAATTGGAACTATGTTCTGGGATGACAAATATGGAGCACAGGGATTATCTCCAGAAGTCATTAGTAGAATGAGAGTGCTTATGACAGAAGACTCAATAAACATACCCAATAACTCATTCCTTCTCGAGGTGGATTCCAGCATACCATTCTTAATGGAGGAGATGTTCAGGTCCATGAGTGATATCCGTCTATCAGATATGGATGTGGATCCACCACCAATCCTCAGGCAAAGATCTGATTTCCAATTCTTGTTGCAACAAATGGATAGTGACTCTCAGTGA 4494 0.3996 MTKLAYLHEPGVLHNLACRFSLNEIYTYTGNILIAVNPFRRLPHLYAIHMMEQYKGAAFGELSPHLFAVADTCYRAMINENGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSRTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNGKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPQEDVKKYKLGDPRQFHYLNQTNCYEVSNVDDAKEYLETRNAMDIVGINQDEQDAIFRVVAAILHLGNIDFVKGKEVDSSKLKDDKSLFHLRTVAELLMCEERALEDSLCKRVIVTPDGNITKPLDPEAAALSRDALAKTVYSRLFDWIVDKINSSIGQDSNAVSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKGHKRFSKPKLARTDFTVNHYAGDVTYQADYFLDKNKDYVVAEHQALLWASKCQFVANLFPPLPEETSKQSKFSSIGSQFKQQLQSLMETLSTTEPHYIRCVKPNSVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFEEFLDRFGMLAPDVLDGSDEKKASIAICDKMGLKGYQMGKTKVFLRAGQMAELDARRAEVLAKAARRIQRQIRTHLTRKEFITLRKATILIQKIWRAKLARKLYEHMRREAASIRIQKHVRAHRARMYYTSLQASAIIIQSGLRALAARNEYRYRRRTKASTKIQTQWRRVQALSDYKQQKRATVTLQCLWRVKVARKELRKLKMAARETGALKEAKDKLEKRVEELTWRLDIEKHLRIDLEEAKGQEIAKLQNALQEMQAQLDEAHAAIIQEKEAAKIAIEQAPPVIKEVPVVDNTKLGLLTNKNEKLESEVEELTKKIQKFEERYSEIENETQARLKEAEEAQLKATQLQETIERLELSLSNLESENQVLCQQALVESKNEELSEEIKTLKGRIANLESEKQFLRSQAAVAVEQKVHPEIIETDQEITVNLDNGNQTEEEMHARKEPRAPVSFLTKQRSLTDRQQESHDALLKCLTEDKRFEKNRPAVACIAYKALLHWRSFEAEKTHIFDKIIHSIRSSIESQEGINDLAYWLSTTSTLLFYLQCTLKASNTTKAVSRNRNSPATLFGKMAQGLRSSSMGLGISSGYSGMVDKPNEQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRSIRTRSIRGSSRNIHSNIVAKQQALHMHWKSIVNKLDHVLGILSDNYVPPIITRKIISQVFSFMNVQLFNSLLLRRECCSFSNGEYLKAGLHELELWCLKATDQFAGSSWDELKHIRQAVGFLVLHQKTQKSLDEITNELCPVLSIPQIYRIGTMFWDDKYGAQGLSPEVISRMRVLMTEDSINIPNNSFLLEVDSSIPFLMEEMFRSMSDIRLSDMDVDPPPILRQRSDFQFLLQQMDSDSQ 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1209g00009 1497 FunFam unconventional myosin-Va 670 718 - -
Gabi1209g00009 1497 ProSiteProfiles IQ motif profile. 787 816 IPR000048 GO:0005515
Gabi1209g00009 1497 FunFam unconventional myosin-Va 766 814 - -
Gabi1209g00009 1497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 719 IPR027417 -
Gabi1209g00009 1497 CDD MYSc_Myo11 10 653 IPR036018 -
Gabi1209g00009 1497 Gene3D Myosin VI head, motor domain, U50 subdomain 246 535 - -
Gabi1209g00009 1497 ProSiteProfiles IQ motif profile. 764 793 IPR000048 GO:0005515
Gabi1209g00009 1497 Gene3D Kinesin motor domain 1 596 IPR036961 -
Gabi1209g00009 1497 ProSiteProfiles Myosin motor domain profile. 1 665 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi1209g00009 1497 Gene3D - 373 557 - -
Gabi1209g00009 1497 PRINTS Myosin heavy chain signature 26 45 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi1209g00009 1497 PRINTS Myosin heavy chain signature 363 391 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi1209g00009 1497 PRINTS Myosin heavy chain signature 130 157 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi1209g00009 1497 PRINTS Myosin heavy chain signature 83 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi1209g00009 1497 PRINTS Myosin heavy chain signature 416 444 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi1209g00009 1497 ProSiteProfiles IQ motif profile. 668 695 IPR000048 GO:0005515
Gabi1209g00009 1497 PANTHER MYOSIN 1 1422 - -
Gabi1209g00009 1497 SMART MYSc_2a 1 666 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gabi1209g00009 1497 Gene3D - 186 244 - -
Gabi1209g00009 1497 ProSiteProfiles IQ motif profile. 716 742 IPR000048 GO:0005515
Gabi1209g00009 1497 Coils Coil 906 1023 - -
Gabi1209g00009 1497 Coils Coil 849 883 - -
Gabi1209g00009 1497 CDD MyosinXI_CBD 1071 1457 IPR037975 GO:0007015
Gabi1209g00009 1497 Pfam DIL domain 1310 1413 IPR002710 -
Gabi1209g00009 1497 ProSiteProfiles IQ motif profile. 691 720 IPR000048 GO:0005515
Gabi1209g00009 1497 FunFam Myosin heavy chain 186 241 - -
Gabi1209g00009 1497 SMART iq_5 786 808 IPR000048 GO:0005515
Gabi1209g00009 1497 SMART iq_5 715 737 IPR000048 GO:0005515
Gabi1209g00009 1497 SMART iq_5 690 712 IPR000048 GO:0005515
Gabi1209g00009 1497 SMART iq_5 667 689 IPR000048 GO:0005515
Gabi1209g00009 1497 SMART iq_5 738 760 IPR000048 GO:0005515
Gabi1209g00009 1497 SMART iq_5 763 785 IPR000048 GO:0005515
Gabi1209g00009 1497 Gene3D - 601 663 - -
Gabi1209g00009 1497 Gene3D - 766 815 - -
Gabi1209g00009 1497 Gene3D - 666 717 - -
Gabi1209g00009 1497 Gene3D - 718 765 - -
Gabi1209g00009 1497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 720 816 IPR027417 -
Gabi1209g00009 1497 SMART DIL_2 1309 1416 IPR002710 -
Gabi1209g00009 1497 Pfam IQ calmodulin-binding motif 789 808 IPR000048 GO:0005515
Gabi1209g00009 1497 Pfam IQ calmodulin-binding motif 670 688 IPR000048 GO:0005515
Gabi1209g00009 1497 Pfam IQ calmodulin-binding motif 718 736 IPR000048 GO:0005515
Gabi1209g00009 1497 Pfam IQ calmodulin-binding motif 692 711 IPR000048 GO:0005515
Gabi1209g00009 1497 Coils Coil 810 844 - -
Gabi1209g00009 1497 ProSiteProfiles IQ motif profile. 739 768 IPR000048 GO:0005515
Gabi1209g00009 1497 ProSiteProfiles Dilute domain profile. 1120 1434 IPR002710 -
Gabi1209g00009 1497 FunFam Myosin 2 246 363 - -
Gabi1209g00009 1497 FunFam Class V myosin 373 510 - -
Gabi1209g00009 1497 Pfam Myosin head (motor domain) 1 653 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1209g00009 Gabi-Chr1209 107461 120807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1209g00009 50 1492 Myosins gene family AT2G31900 74.464 0.0 2237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1209g00009 K10357 - gmx:100817933 2698.31