Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1207g00003 ATGGAATTCCAAAGCGAAGAGCATGCTGCCAAACTGCTTAATGCTCAAACCCACATATGGAATCACATTTGCAGCTTCATAAACTCTATGTCCCTTAAATGTGCAATTGACTTAGGCATACCAGAAGCCATTCACAACTATGGTAAACCCATGCCACTCTCACAACTCATTGCTTCACTATCTATCCACCCTTCCAAAACCTCCTTCATCTACCGCTTGATGCGAATTTTGGCTCATTCTGGCTTCTTTTCTCAACAGAATACCATCGAGAATGAGCTAGAAACGGGTTATGTGCTCACTGATGCATCTATTCTACTTCTCAAGGACAACCCATTGAGTCAGAGGCCTTTCTTGCTTGGCATGCTTGATCCAATTTTGACTGAATCATGGCATCATTTCCCTACATGGTTTAGAAATGATGATCCTACCCCATTTCACACAGCACACAAGATGACAATTTGGGATTATGCTGGCTCCAACCCAAAATTTAATCAGTTTTTCAATGATGCCATGGCAAGTGATGCTAGATTGATTGCCAGTGTGGTAATTGAGAGGTGCAAGGGAGTGTTCAATGGATTGGAATCACTTGTAGATGTTGGGGGAAGCACTGGCACTATGGCTAAGGCCATTGCCAAATCATTCCCACAACTTGATTGCACTGTATTTGATCTTCCACATGTTGTTGCTGATTTGCAAGGAAGTGACAACCTTAAATATGTTGGAGGAGACATGTTTCACTCAATTCCTCCTGCCAATGCCATTTTATTTAAGTCAATATTGCATGATTGGAATGATGAAGAATGTGTGAAAATATTGAAGAAATGCAAGGAGGCAATCATGAACAAAGGCAAAGAAGGAAAGTTGATCATAATAGACATGGTGATAGGGAATGAGAAGCGAGATGATGAATCAGTAGAAGCGCAACTCTTCTTTGATATGCTGATGTTGGTGTTGGTAACAGGAAAAGAGAGAAGTGAAAAAGAATGGGCTAAGTTGATTTTCTCTGCTGGTTTCAGTGATTACAAGATAACTCCAGTTTTGGGTTTAAGGTCTCTCATTGAGGTTTATCCGTAG 1074 0.4088 MEFQSEEHAAKLLNAQTHIWNHICSFINSMSLKCAIDLGIPEAIHNYGKPMPLSQLIASLSIHPSKTSFIYRLMRILAHSGFFSQQNTIENELETGYVLTDASILLLKDNPLSQRPFLLGMLDPILTESWHHFPTWFRNDDPTPFHTAHKMTIWDYAGSNPKFNQFFNDAMASDARLIASVVIERCKGVFNGLESLVDVGGSTGTMAKAIAKSFPQLDCTVFDLPHVVADLQGSDNLKYVGGDMFHSIPPANAILFKSILHDWNDEECVKILKKCKEAIMNKGKEGKLIIIDMVIGNEKRDDESVEAQLFFDMLMLVLVTGKERSEKEWAKLIFSAGFSDYKITPVLGLRSLIEVYP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1207g00003 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 357 IPR016461 GO:0008168
Gabi1207g00003 357 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Gabi1207g00003 357 Gene3D - 2 106 IPR036388 -
Gabi1207g00003 357 Gene3D Vaccinia Virus protein VP39 107 357 IPR029063 -
Gabi1207g00003 357 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Gabi1207g00003 357 Pfam O-methyltransferase domain 130 339 IPR001077 GO:0008171
Gabi1207g00003 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 356 IPR029063 -
Gabi1207g00003 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Gabi1207g00003 357 PANTHER O-METHYLTRANSFERASE 13 342 IPR016461 GO:0008168
Gabi1207g00003 357 FunFam O-methyltransferase ZRP4 108 357 - -
Gabi1207g00003 357 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1207g00003 Gabi-Chr1207 61533 62939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1207g00003 30 344 Monolignol Biosynthesis Gene Families AT5G54160 33.750 6.53e-53 177