Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1206g00010 ATGGTTAGATCCTGCTGGAAACCTTATGTTGATGGTGATGATGATGATGGGAGTGGCCGAGTTGATGGACTTCTATGGTATAAGGATTTGGGGAACCATCTTTATGGGGAATTCTCAATGGCTGTGGTTCAGGCCAATAGGTCATTGGAGGATCGAAGCCAACTTGAGTCTGGACCCTTAAGTTCTAACCATTTGGGTCCACAAGGGACCTTTATAGGTGTATATGATGGTCATGGTGGAACTGAGGCCTCACAATTTGTCAGTGACAATCTTTTCTGCAATCTCAAAAGGCTTGCAGCTGAACATCAAGGCATGTCAGAATATGTTATCAAAAGGGCATTTTCAGCAACAGAGGCAGGTTTTCTATCTCTTGTGAAGAAACAGTGGCTAAGTAAGCCATATATTGCATCCACGGGTACTTGTTGTTTGGTGGGGATAATTTGCGATGGCATGTTATATGTTGCAAATTCTGGAGACTCCCGGGTGGTGCTAGGAAGAGTAGAGAGGGCAACAAGGGAAACATCAGCTATACAATTATCTTCAGAACACAATGTTAACCAAGAAACAGCCAGAGATGAAATTCGGTCTAAGCACCCTTATGATTCACAAATTGTGGTTATGAGACACAACGTTTGGCGTGTGAAAGGCCTCATACAGGTTTCACGATCCATAGGTGATGCATATCTGAAGAAAGCAGAATTTAACAGGGAGCCTCTACCATCAAAGTTTAGACTAGCTGAAACATTCTTCAAGCCAATTCTTAGTTGTGAGCCAACAATATCATTGCACAAACTCCATCCTGACGATCAATTTCTCATATTTGCTTCTGATGGTTTATGGGAACATATTAGCAACCAAGAGGCTGCTAACATAGTCACCAATAACCCACCTAACGGAATTGCTAGGAGACTTGTGAAAACTGCACTTCGAGAAGCAGCTAAGAAGAGAGAAATGAGACTTGCAGACCTCCAAAAGATTGAACAAGGGGTGAGGAGAGACTTCCATGATGATATAACAGTGATTGTTGTATTTCTAGATCACAATCTCACTCATAACAGTTCTCTCTGGGGTTCTCCTGTTTCAATCAAGGGAGGTGGGCATGCCACTTCCTAG 1113 0.4277 MVRSCWKPYVDGDDDDGSGRVDGLLWYKDLGNHLYGEFSMAVVQANRSLEDRSQLESGPLSSNHLGPQGTFIGVYDGHGGTEASQFVSDNLFCNLKRLAAEHQGMSEYVIKRAFSATEAGFLSLVKKQWLSKPYIASTGTCCLVGIICDGMLYVANSGDSRVVLGRVERATRETSAIQLSSEHNVNQETARDEIRSKHPYDSQIVVMRHNVWRVKGLIQVSRSIGDAYLKKAEFNREPLPSKFRLAETFFKPILSCEPTISLHKLHPDDQFLIFASDGLWEHISNQEAANIVTNNPPNGIARRLVKTALREAAKKREMRLADLQKIEQGVRRDFHDDITVIVVFLDHNLTHNSSLWGSPVSIKGGGHATS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1206g00010 370 Gene3D - 28 354 IPR036457 -
Gabi1206g00010 370 CDD PP2Cc 35 345 IPR001932 -
Gabi1206g00010 370 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Gabi1206g00010 370 SUPERFAMILY PP2C-like 46 346 IPR036457 -
Gabi1206g00010 370 FunFam Phosphatase 2C family protein 26 355 - -
Gabi1206g00010 370 PANTHER PROTEIN PHOSPHATASE 29 343 IPR015655 GO:0004722|GO:0006470
Gabi1206g00010 370 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Gabi1206g00010 370 Pfam Protein phosphatase 2C 57 314 IPR001932 -
Gabi1206g00010 370 SMART PP2C_4 31 343 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1206g00010 Gabi-Chr1206 99435 102449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1206g00010 1 366 PP2C-type Phosphatase Gene Family AT3G12620 66.125 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1206g00010 K01102 - gmx:100819870 641.343