Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1196g00015 ATGTATTCCAAGTATGATTTTATTAAGGATCTTAATCCTTCTAAGGAGGAGTGGAGGATTAAGGCTAGAGTTGTTAGAACATGGAAGGTTCCTAATTTTCAGCAAAAACATTTTGACGACAACGTAGAGATGATTCTGTTAGATGAAAAGGGTGGAAGGGTCCACGCTGCTATCAAGGGTTCTTTAAATATCCATAACAAAATTCACGAAGGAGAAGTTTATTTCATAAAATTTTTTGGAGTTGGTTTGAATAGTGGGAGTTTCAGGCCAACTAAGCATGATTATCGTTTGTCCTTCAACTTGAGGACTGATGTAAAATCCACTATTGATTCTGCTATTCCCACCAATGGATTTGATTTTGACGTTATAGAGAAAGAGTCTTCTGATTCCCCTTATTTAGTAGATGTCATCGGTTTAGTTTCTGGAATAGGGGAAGTTCGTGAGCATATTATCTCCGGTAGGAAGACAAAAATGGTTGTCGTGGAGCTTGATAACCTCAGGGGTCATAAGCTCGAGTGCACTCTCTGGGAGGACTACGTGGACCAGGTGCAACAAATTTTGGGGAGTAATCAATCTCCTCCAAACGTGATAATAGTTCAGCTTGCTAGAATAAAAGGTTTCAGGGGTGAGTTCACATAA 639 0.3928 MYSKYDFIKDLNPSKEEWRIKARVVRTWKVPNFQQKHFDDNVEMILLDEKGGRVHAAIKGSLNIHNKIHEGEVYFIKFFGVGLNSGSFRPTKHDYRLSFNLRTDVKSTIDSAIPTNGFDFDVIEKESSDSPYLVDVIGLVSGIGEVREHIISGRKTKMVVVELDNLRGHKLECTLWEDYVDQVQQILGSNQSPPNVIIVQLARIKGFRGEFT 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1196g00015 212 Gene3D - 7 110 IPR012340 -
Gabi1196g00015 212 SUPERFAMILY Nucleic acid-binding proteins 127 209 IPR012340 -
Gabi1196g00015 212 CDD RPA1_DBD_B_like 135 210 - -
Gabi1196g00015 212 SUPERFAMILY Nucleic acid-binding proteins 5 110 IPR012340 -
Gabi1196g00015 212 Gene3D - 112 212 IPR012340 -
Gabi1196g00015 212 Pfam Domain of unknown function DUF223 43 130 IPR003871 -
Gabi1196g00015 212 CDD RPA1_DBD_A_like 19 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1196g00015 Gabi-Chr1196 173524 174418 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1196g00015 8 210 Core DNA Replication Machinery Family AT4G19130 28.054 8.41e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1196g00015 - - tpra:123908197 160.999