Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1194g00010 ATGGCTAGGGTTACTGCAAGTAGAACTCCTTCTTTGTACTCTTTGCTCTTGATTTCTTCTTTTCTATTGGCCTCTCAAATCAATGTCTCCTTCTCTGAGAGAGTAGCAAGACCTCCCATTGTGAAGGGACTTGCATGGGATTTCTATTGGTTGTCATGTCCTAGGCTTGAAAGGATTGTGAGGAAGCATCTTGAGGATGTCTTCGAGAAGGACATTGGCCAAGCTCCTGGCATACTTCGAATCTTCTTCCATGATTGCTTTCCTCAGGGATGCGATGGGTCTATATTGTTGAATGGGGTTGGAGAAGATGATGAAAAGGAACACTTTGCCAACGCAGGATTAAGGGAAGAGGCTCTTCAAACCATTGAAAACCTAAGGGCTCTTGTCCGCAAACAGTGTCCAAGGGTTGTCACGTGCGCTGACATCCTCGTTATGGCAGCGCGCGAAGCTGTTCGCCAATTAGGAGGACCCGATTTTGATGTGCCATTGGGAAGAAAAGACAGCCTAACATTCAACGCAACCGCACCAATCGAACTTCCACCACCATTTTTACGAACCGATGAATTGCTTGGTGTTTTTGGAGCTAAAAAATTCGATGCCACGGATGTAGTAGCACTCTCAGGTGCACACACTTATGGTCGAGCCCATTGTGGTTCATTATTCAATAGGACCACAGAATCAAACCCTCCCATTGACCCAGATTTGAAGAAAAAACTCCAAGCCACATGCCCAAATGATGAATCACCCAACACTGTTGATTTGGACATTAGAACTCCACACAAGTTTGATAACATGTACTATATCAACCTTTTGAACCGCCAGGGTGTGTTCACTTCTGACCAAGATATTGCCACTCATCCAAAAACTAAGGAGATTGTGAACCTCTTTGCTTCTGATCAGAAACAATTTTTTGACAAATTTGCAAATGCTTTTGTTAAAGTGAGCCAGTTGGATGTGTTGACTGGGAATCAAGGGGAAGTTCGCAAGACGTGTTTTGCTCCAAATAGTAGAAGAAAATCTGTGGTGGACGAGGTTGTGGAATTGGTTGAGAAGTTCTAA 1059 0.44 MARVTASRTPSLYSLLLISSFLLASQINVSFSERVARPPIVKGLAWDFYWLSCPRLERIVRKHLEDVFEKDIGQAPGILRIFFHDCFPQGCDGSILLNGVGEDDEKEHFANAGLREEALQTIENLRALVRKQCPRVVTCADILVMAAREAVRQLGGPDFDVPLGRKDSLTFNATAPIELPPPFLRTDELLGVFGAKKFDATDVVALSGAHTYGRAHCGSLFNRTTESNPPIDPDLKKKLQATCPNDESPNTVDLDIRTPHKFDNMYYINLLNRQGVFTSDQDIATHPKTKEIVNLFASDQKQFFDKFANAFVKVSQLDVLTGNQGEVRKTCFAPNSRRKSVVDEVVELVEKF 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1194g00010 352 Pfam Peroxidase 60 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 PANTHER - 21 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 CDD secretory_peroxidase 43 333 IPR033905 GO:0004601|GO:0042744
Gabi1194g00010 352 Gene3D - 47 331 - -
Gabi1194g00010 352 Gene3D Peroxidase, domain 2 181 315 - -
Gabi1194g00010 352 FunFam Peroxidase 47 182 - -
Gabi1194g00010 352 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Gabi1194g00010 352 ProSitePatterns Peroxidases proximal heme-ligand signature. 202 212 IPR019793 -
Gabi1194g00010 352 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 FunFam Peroxidase 180 314 - -
Gabi1194g00010 352 SUPERFAMILY Heme-dependent peroxidases 44 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 ProSiteProfiles Plant heme peroxidase family profile. 43 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 PRINTS Haem peroxidase superfamily signature 202 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi1194g00010 352 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1194g00010 Gabi-Chr1194 190654 192977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1194g00010 6 347 Peroxidase AT1G71695 47.578 6.52e-107 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1194g00010 K00430 - gmx:100795412 469.544