Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1193g00030 ATGTTGCGTTACTCAGACCGCTCAATATTTGACACCATGGAAACTGGACCTGCTTATTATGCCAACAACATGCTAAATGCAACGAATTTGGATGAGTTCAATCAAGTGTTGAATACCTTGCTCGGAAGCCTAAGAAGCAAAGCTGCATCAGGTGACTCTCGTCTTAAGTATGCCGCGGATAAATCAAGTGACCGAAACTTTCAAACCATATATGGTCTTGTGCAGTGCACGCCCGATTTGTCTGCTTCACAGTGTGATGATTGCTTGGTTCAGTCCATTGCACGTATCCCAATAGATTGTTGTAAAGACAGGATAGGTGGAAGAGTTGTTAGACCTAGTTGTAATATGAGGTTCGAAACCTCCTTCCTTTTCTATGATCCTACACCATCAACCACCACCACTAACACTTCATCTTCCTCTGGAGGAAAGAGCAACACAACTGTCATCGCCATAACAGTACCAATTGCTGTTGTTGTTGTGGTGCTCATTTTTATCTGTATCTATTTTAGAGCGAGGAAGCCAACGAAGAAGTATAAAACTCAAGAAAGAGAAGAAGATGATGAAGATGATGATGATATTGAAATTTCTGAGTCATTGCAATTCAACTTTAACACCATTCGAGATGCTACGAATGACTTTTCTGATTCTAATAAACTCGGACAAGGCGGATTTGGGGCTGTTTACAGGGGTAGTCTCTCCGATGGACAAGAAATTGCTGTCAAAAGGTTGTCCAAGGATTCTGGCCAAGGAGATCTAGAATTCAAGAATGAAGTGCTTTTAGTGGCTAAGCTCCAACATCGAAATTTAGTAAGACTACTTGGTTTCTGTCTGGAAGGAAAAGAAAGGCTACTTGTCTATGAATTTGTTCCTAATAAAAGCCTTGATTACTTCATATTTGATCAAACCAAGAGAGCACAATTAAATTGGGAGAGCCGCTACAAAATCATTGCTGGTATTGCTCGAGGCATTCTTTACCTTCATGAGGATTCTCGACTGCGCATTATCCATCGTGATCTCAAAGCAAGTAACATTCTCTTAGATGGAGAGATGAGTCCCAAGATATCCGATTTTGGCATGGCAAGACTGTTTATTGTGGACCAAACTCATGGAGATACAAATAGAATTGTTGGAACCTATGGATATATGGCACCTGAGTATGCAATGCATGGACAGTTTTCAGTGAAGTCAGATGTCTTTAGTTTTGGTGTACTGGTTCTTGAGATTGTGAGTGGCCAGAAAAATTGCAGCATTGGTCAAGGGGAGAATATAGAGGATCTACTGAGCCTTGCATGGAGAAATTGGAGGGACGGATCAGCCACAAATATTATAGATCCCATGTTAAACAATGATTCACGAAATGAAATAATGAGATGCATCCACATTGGGTTACTTTGTGTTCAAGAAAATGTAGCTAGCAGACCAACCATGGCTTCCGTTGTACTGATGCTTAATAGTTATTCTGTCACTCTGTCGCTACCTTCAGAACCTGCATTTTATGTGGATAGTAGAACTGGAAACCTTCCAGACATGTCATGGGAGTATAATTCAGGGGCAACAAGATCAAGCGAATCCACAACTAAATCAGCTCAAGCATCGGTCGACGAGGCTCCAATTACTGAGCTACATACTCGCTAG 1635 0.4122 MLRYSDRSIFDTMETGPAYYANNMLNATNLDEFNQVLNTLLGSLRSKAASGDSRLKYAADKSSDRNFQTIYGLVQCTPDLSASQCDDCLVQSIARIPIDCCKDRIGGRVVRPSCNMRFETSFLFYDPTPSTTTTNTSSSSGGKSNTTVIAITVPIAVVVVVLIFICIYFRARKPTKKYKTQEREEDDEDDDDIEISESLQFNFNTIRDATNDFSDSNKLGQGGFGAVYRGSLSDGQEIAVKRLSKDSGQGDLEFKNEVLLVAKLQHRNLVRLLGFCLEGKERLLVYEFVPNKSLDYFIFDQTKRAQLNWESRYKIIAGIARGILYLHEDSRLRIIHRDLKASNILLDGEMSPKISDFGMARLFIVDQTHGDTNRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLVLEIVSGQKNCSIGQGENIEDLLSLAWRNWRDGSATNIIDPMLNNDSRNEIMRCIHIGLLCVQENVASRPTMASVVLMLNSYSVTLSLPSEPAFYVDSRTGNLPDMSWEYNSGATRSSESTTKSAQASVDEAPITELHTR 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1193g00030 544 Pfam Salt stress response/antifungal 27 120 IPR002902 -
Gabi1193g00030 544 Gene3D - 17 122 IPR038408 -
Gabi1193g00030 544 ProSiteProfiles Protein kinase domain profile. 213 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1193g00030 544 SUPERFAMILY Protein kinase-like (PK-like) 201 501 IPR011009 -
Gabi1193g00030 544 Gene3D Phosphorylase Kinase; domain 1 173 288 - -
Gabi1193g00030 544 SMART serkin_6 213 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1193g00030 544 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 43 537 - -
Gabi1193g00030 544 CDD STKc_IRAK 219 484 - -
Gabi1193g00030 544 FunFam Cysteine-rich receptor-like protein kinase 17 181 288 - -
Gabi1193g00030 544 ProSiteProfiles Gnk2-homologous domain profile. 15 123 IPR002902 -
Gabi1193g00030 544 FunFam cysteine-rich receptor-like protein kinase 10 289 490 - -
Gabi1193g00030 544 MobiDBLite consensus disorder prediction 511 533 - -
Gabi1193g00030 544 MobiDBLite consensus disorder prediction 511 544 - -
Gabi1193g00030 544 ProSitePatterns Protein kinases ATP-binding region signature. 219 241 IPR017441 GO:0005524
Gabi1193g00030 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672|GO:0006468
Gabi1193g00030 544 Gene3D Transferase(Phosphotransferase) domain 1 289 492 - -
Gabi1193g00030 544 Pfam Protein tyrosine and serine/threonine kinase 216 480 IPR001245 GO:0004672|GO:0006468
Gabi1193g00030 544 FunFam Cysteine-rich receptor-like protein kinase 10 17 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1193g00030 Gabi-Chr1193 192154 195631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1193g00030 1 502 Receptor kinase-like Gene Family AT4G21410 53.788 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi1193g00030 PK_Tyr_Ser-Thr 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1193g00030 - - lang:109335396 733.406