Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1193g00026 ATGGCAGTTCTTTCTTTAAGGTTACTTTCCTTTCTCTGTTGTCTCATTGTCATAATCATTTTCATATCTCAAGCCAGCGCTGATGAAAGTTCACAAATATACCAATACTTCTGTGGTTTTAATAACAAGGGTAACTACACGGCCAATAGCACCTATCACACGAACCTCAACACCCTTTTGTCCAATCTCACTCCCAACACAGAAATTGACTACGGTTTCTACAATTTGTCATATGGACAAAACAATGACAAAGTAAACGCTATTGGGTTGTGCAGAGGAGATATTAAGTCAGATGCTTGCCGAGGTTGTCTCAAAGATTCCATAGCCAATCTGACACAGCTCTGTCCAAACCAGAAGGAAGCAATTGGTTGGTATGAGGATGAGAAATGCATGTTGCGTTACTCAGACCGCTCAATATTTGACACCATGGAAACTGGACCTGCGTATTTTGTGTGGAACTTACAGAATGCAACAGAGGTGGACCAGTTCAATAAGGTGCTCAAGAACTTGCTCGAAAGCCTAAGAAGCAAAGCTACATCAGGTGACTCTCGTCGTAAATATGCTACGGATAACGCAGCTGCCTCAAATAATCAAATCATATATGGTCTTGCTCAATGCACGCCTGATTTGTCTGCTTTACAGTGTGATAACTGCTTGGTCCAGTCTATCGCAGAATTCCCAAATTGTTGTAATAACAGGATAGGTGCCAGAGTTATTAGACCCAGTTGTAGTTTGAGATACGAAATATCTCGCTTCTATGAGTTGACACCAGATACACCGTCACCATCACCGTCACCGCTTCCATCGCTGCCACCTCCTCCGTCCACTTCTAAAACTTCCGACAACCAATATGGCAGAAAGAGCAACACAACTGTCATCGCCATAACAGTACCAATTGCTGTTGTTGTTGTGGTGCTCATTTTTATCTCTCAAGAAAGAGAAGAAGATGATGAAGATGATGATGATATTGAAATTTCTGAGTCATTGCAATTCAACTTTAACACCATTCGAGATGCTACGAATGACTTTTCTGATTCTAATAAACTCGGACAAGGCGGATTTGGGGCTGTTTACAGGGGTAGTCTCTCCGATGGACAAGAAATTGCTGTCAAAAGGTTGTCCAAGGATTCTGGCCAAGGAGATCTAGAATTCAAGAATGAAGTGCTTTTAGTGGCTAAGCTCCAACATCGAAATTTAGTAAGACTACTTGGTTTCTGTCTGGAAGGAAAAGAAAGGCTACTTGTCTATGAATTTGTTCCTAATAAAAGCCTTGATTACTTCATATTTGATCAAACCAAGAGAGCACAATTAAATTGGGAGAGCCGCTACAAAATCATTGCTGGTATTGCTCGAGGCATTCTTTACCTTCATGAGGATTCTCGACTGCGCATTATCCATCGTGATCTCAAAGCAAGTAACATTCTCTTAGATGGAGAGATGAGTCCCAAGATATCCGATTTTGGCATGGCAAGACTGTTTATTGTGGACCAAACTCATGGAGATACAAATAGAATTGTTGGAACCTATGGATATATGGCACCTGAGTATGCAATGCATGGACAGTTTTCAGTGAAGTCAGATGTCTTTAGTTTTGGTGTACTGGTTCTTGAGATTGTGAGTGGCCAGAAAAATTGCAGCATTGGTCAAGGGGAGAATATAGAGGATCTACTGAGCCTTGCATGGAGAAATTGGAGGGACGGATCAGCCACAAATATTATAGATCCCATGTTAAACAATGATTCACGAAATGAAATAATGAGATGCATCCACATTGGGTTACTTTGTGTTCAAGAAAATGTAGCTAGCAGACCAACCATGGCTTCCGTTGTACTGATGCTTAATAGTTATTCTGTCACTCTGTCGCTACCTTCAGAACCTGCATTTTATGTGGATAGTAGAACTGGAAACCTTCCAGACATGTCATGGGAGTATAATTCAGGGGCAACAAGATCAAGCGAATCCACAACTAAATCAGCTCAAGCATCGGTCGACGAGGCTCCAATTACTGAGCTACATACTCGCTAG 2025 0.4148 MAVLSLRLLSFLCCLIVIIIFISQASADESSQIYQYFCGFNNKGNYTANSTYHTNLNTLLSNLTPNTEIDYGFYNLSYGQNNDKVNAIGLCRGDIKSDACRGCLKDSIANLTQLCPNQKEAIGWYEDEKCMLRYSDRSIFDTMETGPAYFVWNLQNATEVDQFNKVLKNLLESLRSKATSGDSRRKYATDNAAASNNQIIYGLAQCTPDLSALQCDNCLVQSIAEFPNCCNNRIGARVIRPSCSLRYEISRFYELTPDTPSPSPSPLPSLPPPPSTSKTSDNQYGRKSNTTVIAITVPIAVVVVVLIFISQEREEDDEDDDDIEISESLQFNFNTIRDATNDFSDSNKLGQGGFGAVYRGSLSDGQEIAVKRLSKDSGQGDLEFKNEVLLVAKLQHRNLVRLLGFCLEGKERLLVYEFVPNKSLDYFIFDQTKRAQLNWESRYKIIAGIARGILYLHEDSRLRIIHRDLKASNILLDGEMSPKISDFGMARLFIVDQTHGDTNRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLVLEIVSGQKNCSIGQGENIEDLLSLAWRNWRDGSATNIIDPMLNNDSRNEIMRCIHIGLLCVQENVASRPTMASVVLMLNSYSVTLSLPSEPAFYVDSRTGNLPDMSWEYNSGATRSSESTTKSAQASVDEAPITELHTR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1193g00026 674 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 31 139 - -
Gabi1193g00026 674 MobiDBLite consensus disorder prediction 641 663 - -
Gabi1193g00026 674 SMART serkin_6 343 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1193g00026 674 ProSiteProfiles Gnk2-homologous domain profile. 145 252 IPR002902 -
Gabi1193g00026 674 Gene3D - 147 252 IPR038408 -
Gabi1193g00026 674 Gene3D - 32 138 IPR038408 -
Gabi1193g00026 674 CDD STKc_IRAK 349 614 - -
Gabi1193g00026 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Gabi1193g00026 674 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 40 666 - -
Gabi1193g00026 674 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Gabi1193g00026 674 MobiDBLite consensus disorder prediction 259 275 - -
Gabi1193g00026 674 SUPERFAMILY Protein kinase-like (PK-like) 331 631 IPR011009 -
Gabi1193g00026 674 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Gabi1193g00026 674 MobiDBLite consensus disorder prediction 641 674 - -
Gabi1193g00026 674 MobiDBLite consensus disorder prediction 256 285 - -
Gabi1193g00026 674 ProSiteProfiles Protein kinase domain profile. 343 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1193g00026 674 FunFam cysteine-rich receptor-like protein kinase 10 419 620 - -
Gabi1193g00026 674 FunFam Cysteine-rich receptor-like protein kinase 10 147 252 - -
Gabi1193g00026 674 Pfam Salt stress response/antifungal 38 136 IPR002902 -
Gabi1193g00026 674 Pfam Salt stress response/antifungal 155 248 IPR002902 -
Gabi1193g00026 674 FunFam Cysteine-rich receptor-like protein kinase 17 309 418 - -
Gabi1193g00026 674 Gene3D Transferase(Phosphotransferase) domain 1 419 622 - -
Gabi1193g00026 674 Gene3D Phosphorylase Kinase; domain 1 306 418 - -
Gabi1193g00026 674 Pfam Protein tyrosine and serine/threonine kinase 346 610 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1193g00026 Gabi-Chr1193 182862 195631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1193g00026 6 632 Receptor kinase-like Gene Family AT4G21410 50.153 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi1193g00026 PK_Tyr_Ser-Thr 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1193g00026 - - lang:109335396 852.818