Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1193g00021 ATGGCAAGAGTTTCTTGGAGGTTGTTTACCTTTCTTTGTTGTCTCCTTTTCATGATCATATCTCAAACCAGCGCCCAGCCAAATCACTTGTGCTCCAATGATAAAGGCAACTACACAGCCAATAGCACATATCAGACCAACCTCAACACCCTTTTATCCAATCTCACTTCCAACACAGAAATCAACTATGGTTTCTACAATTTCTCATATGGCCAAGACAGTGAGAAAGTAAACGCCATTGGACTGTGCAGAGGAGATCTTAAGCCAGATGATTGTCGCAGTTGCCTCAACGATTCCAGAGGAAATCTCACACAGATTTGTCCGAACCAGAAAGAGGCAATTGTGTGGCTTGAAAAATGCATGTTGCGCTACTCCAACCGCTCAATTTTTGGCATATTGGAAACCATACCAACTATTTATGCGTGGAATGTTAACAATGCAACGGATGCGGATCAGATCAATCAAGAGCTGGTTAAATTGATAGATAATCTAAAAGGCTCAGCTGCATCAGGTGACTCTCGTCGTAAGTATGCTGCGGATGATGCACTTGCTTTAAATTTTCAACCCATATATGGTCTTGTGCAGTGTACGCCTGATTTGTCTTGGCAAAACTGCACCGACTGCTTGGATATGATTATCAAGCAAATCCGAATATGTTGCACAGACAAAATAGGAGGTAGAGTTATTGGACCCAGTTGTAATATTAGATACGAACTCACTCGCTTTTATGATCCCACGCCAATGTTAGACCCAGGTACACCGCCACCGACACCGCTGCCATCACCACCACCACCTTCGCCTAAACTGATTTGTGCAGGAAAGAGCAACACATCACGAACTGCCATCGTCATAGCAGTGCCGGTTGTTGCTGTTGTTGTTTTTGTGCTCTGTTTTATCTGCATCTATTTAAGAGTGAGGAACCCAAGGAAATATTTTGAAACTGAACTTAATGATGATGAAATTATAACCAACGAGTCATTGCAAGTCAACTTTGATACCATACAAGTTGCTACAAATGACTTCTCAGATTCTAATAAACTTGGACAAGGTGGATTTGGATCTGTTTACAGGGGTAGGCTCTCTAATGAACAAGTGATTGCAGTCAAAAGGTTGTCAAGAGATTCTGGCCAAGGAGATACGGAATTTAAGAATGAAGTGCTTTTATTGGCAAAGCTTCAGCACCGAAATTTAGTTAGACTACTTGGTTTCTGTCTGGAAGGAAGAGAAAGGCTACTTATCTATGAATTTGTTCCGAATAAAAGCCTTGATTACTTCATATTTGATCCAACCAAAAAAGCACAATTGGATTGGGAAAGGCGCTACAAAATCATTGGAGGTATTGCTCGAGGCCTTCTTTACCTTCATCAGGATTCACAACTGCGCATTATACATCGAGATCTCAAAGCGAGCAACATTCTCTTAGATGAAGAGATGAATCCTAAGATAGCAGATTTTGGCTTAGCAAGACTGTTTGTTGTGGATCAAACAGGAGGAAGTACAAGTAGAATCGTGGGAACCTATGGATATATGGCACCAGAGTATGCAATGCATGGACAATTTTCAGTGAAATCAGACGTCTTTAGTTTTGGTGTGCTGGTTCTTGAGATTGTTAGTGGCCAAAAAAATAGCAGCATTCATCATGGGGAGAGTGTAGAGGATCTACCGAGCTTTGCATGGAGAAACTGGAGGGAGGGGACAGCTACAAATATTGTAGATCCATCATTAAACAACAATTCACGAAATGAGATGATGAGATGCATCCACATTGGTTTGCTCTGTGTTCAAGAAAATTTAGCTAACAGACCAACCATGGCTGCCGTTACACTCATGCTTAATAGCTATTCTCAGACTCTCCAGGTACCTTCCGAGCCTGCATTTTATATGGACAGTAGAACTGGAAGCCTTCCACACGTGCAATCATGGGAGTATAATTCAAGGGCAACAAGATCAACTGAATCTGCAAATGAATCAGCTCAAGAATCGGTTAATGAGGCTTCAATTACTGAGCTATACCCTCGCTAG 2022 0.4169 MARVSWRLFTFLCCLLFMIISQTSAQPNHLCSNDKGNYTANSTYQTNLNTLLSNLTSNTEINYGFYNFSYGQDSEKVNAIGLCRGDLKPDDCRSCLNDSRGNLTQICPNQKEAIVWLEKCMLRYSNRSIFGILETIPTIYAWNVNNATDADQINQELVKLIDNLKGSAASGDSRRKYAADDALALNFQPIYGLVQCTPDLSWQNCTDCLDMIIKQIRICCTDKIGGRVIGPSCNIRYELTRFYDPTPMLDPGTPPPTPLPSPPPPSPKLICAGKSNTSRTAIVIAVPVVAVVVFVLCFICIYLRVRNPRKYFETELNDDEIITNESLQVNFDTIQVATNDFSDSNKLGQGGFGSVYRGRLSNEQVIAVKRLSRDSGQGDTEFKNEVLLLAKLQHRNLVRLLGFCLEGRERLLIYEFVPNKSLDYFIFDPTKKAQLDWERRYKIIGGIARGLLYLHQDSQLRIIHRDLKASNILLDEEMNPKIADFGLARLFVVDQTGGSTSRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLVLEIVSGQKNSSIHHGESVEDLPSFAWRNWREGTATNIVDPSLNNNSRNEMMRCIHIGLLCVQENLANRPTMAAVTLMLNSYSQTLQVPSEPAFYMDSRTGSLPHVQSWEYNSRATRSTESANESAQESVNEASITELYPR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1193g00021 673 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Gabi1193g00021 673 Gene3D Transferase(Phosphotransferase) domain 1 417 625 - -
Gabi1193g00021 673 ProSiteProfiles Gnk2-homologous domain profile. 135 242 IPR002902 -
Gabi1193g00021 673 SMART serkin_6 341 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1193g00021 673 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Gabi1193g00021 673 Gene3D Phosphorylase Kinase; domain 1 305 416 - -
Gabi1193g00021 673 Gene3D - 25 128 IPR038408 -
Gabi1193g00021 673 Gene3D - 136 242 IPR038408 -
Gabi1193g00021 673 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Gabi1193g00021 673 Pfam Salt stress response/antifungal 146 238 IPR002902 -
Gabi1193g00021 673 FunFam Cysteine-rich receptor-like protein kinase 10 305 416 - -
Gabi1193g00021 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Gabi1193g00021 673 FunFam cysteine-rich receptor-like protein kinase 10 417 618 - -
Gabi1193g00021 673 CDD STKc_IRAK 347 612 - -
Gabi1193g00021 673 ProSiteProfiles Protein kinase domain profile. 341 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1193g00021 673 MobiDBLite consensus disorder prediction 646 666 - -
Gabi1193g00021 673 Pfam Protein tyrosine and serine/threonine kinase 344 608 IPR001245 GO:0004672|GO:0006468
Gabi1193g00021 673 SUPERFAMILY Protein kinase-like (PK-like) 323 611 IPR011009 -
Gabi1193g00021 673 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Gabi1193g00021 673 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 672 - -
Gabi1193g00021 673 FunFam Cysteine-rich receptor-like protein kinase 10 137 242 - -
Gabi1193g00021 673 MobiDBLite consensus disorder prediction 646 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1193g00021 Gabi-Chr1193 166930 170957 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1193g00021 7 673 Receptor kinase-like Gene Family AT4G21410 50.578 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi1193g00021 PK_Tyr_Ser-Thr 6.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1193g00021 - - gmx:100782800 910.212