Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1193g00019 ATGGCAATAGTTTCTCAGAGGTTGTTTTCCTTTCTTTGTTGTCTCCTTTTCGTGATCATATCTCAAACCAGCGGCCAGCCAAGTTATGTATTCCACCTCTGCACCAATGATAAAGGCAACTACACAGCCAATAGCACATATCATGCCAACCTCAACACCCTTTTATCCAATCTCACTTCCAACACAGAAATCGACTATGGTTTCTACAATTTCTCATATGGCCAAAACACTGACAAAGTAAACGCCATTGGACTGTGCAGAGGAGATCTTAAGTCAGATGCATGCCGCAGTTGCCTCAACTATTCCAGAGTCTTCAATCTAACACAGCTTTGTCCGAACCAGAAAGAGGCAATTGTGTGGTTTGACAAGTGCATGTTGCGCTACTCGAACCGCTCAATATTTGGCATCATGGAAACTTATCCTCCTTTAAATTATTTGTGGAACGATGTCAATGCAACGGATGTGGATCAGTTCAATAAAGTGCTGTTTAACTTGATGAGGAATCTAAAAGGCGCGGCTGCATCAGGTGACTCTCGTCGTAAGTATGCTGCGGATAATGCAACTGTTTCAACTTTCCAAACCATATATGGTATTGTGCAGTGCACGCCTGATTTGTCATCGCAAGGCTGCAAAGATTGCTTGGATGGGGCTATAACGCTAATCCCAGAATGTTGCAATGCCAACAGAGGTGTTACAGTCATTGGACCCAGTTGTAATGTTAGATACCAAACCTACCGCTTTTACGATCCCACGCCAATATTAGACCCAGGTACACCGGCACCGGCACCGCTGGCATCACCACCACCTTCGCCGTCCTCACAAGGAAAGAGCAACACATCACGAACTGCCATCGTCATAGCAGTGCCGGTTGTTGCTATTGTTGTTTTGGTGCTCTGTTTTATCTTCATCTATTTAAGAGCGAGGAAGCCACGTCACTCATTAAAAAACACTGAAGTTGATGATGATGAAATTATAACCAATGAGTCATTGCAATTCAACTTTGATACCATACGAGTTGCTACAGATGACTTCTCAGATGCTAATAAACTCGGACAAGGTGGATTTGGAGCTGTTTACAGGGGTAGGCTCTCTAATGGACAAGTGATTGCAGTCAAAAGGTTGTCAAGAGATTCTGGCCAAGGAGATACGGAATTTAAGAATGAAGTGCTTTTATTGGCCAAGCTTCAGCACCGAAATTTAGTTAGACTACTTGGTTTCTGTCTGGAAGGAAGAGAAAGGCTACTTATCTATGAATTTGTTCCGAATAAAAGCCTTGATTACTTCATATTTGATCCAACCAAGAAAGCACAATTGGATTGGGAAAGGCGCTACAAAATCATTGGAGGTATTGCTAGAGGTCTTCTTTACCTTCATCAGGATTCACAATTGCGCATTATACATCGAGATCTCAAAGCGAGCAACATTCTCTTAGATGGAGAGATGAATCCTAAGATATCAGATTTTGGCTTGGCAAGACTCTTTGTTGTGGATCAAACAGGAGGAAATACAAGTACAATCGTTGGAACCTATGGATATATGGCACCAGAGTATGCAATGCATGGACAGTTTTCAGTGAAATCAGATGTCTTTAGTTTTGGTGTACTGGTTCTTGAGATTGTTAGTGGCCAGAAAAACAGCAGCATTCATCATGGGGAGAGTGTAGAGGATTTACTGAGCTTTGCATGGAGAAACTGGAGGGAGGGGACAGCTACAAATATTGTAGATCCATCATTAAACAACAGTTCGCGAAATGAGATGATGAGATGCATCCACATTGGTTTGCTCTGTGTTCAAGAAAATTTAGCTAACAGACCAACCATGGCTGCCGTTACACTCATGCTTAATAGCTATTCTCAGACTCTCCAGGTACCTTCCGAGCCTGCATTTTATATGGACAGTAGAACTGGAAGCCTTCCACACGTGCAATCATGGGAGTATAATTCAAGGGCAACAATATCAACTGAATCTGCAAATGAATCAGCTCAAGAATCGGTTAATGAGGCTTCAATCACTGAGCCATACCCTCGCTAG 2031 0.4264 MAIVSQRLFSFLCCLLFVIISQTSGQPSYVFHLCTNDKGNYTANSTYHANLNTLLSNLTSNTEIDYGFYNFSYGQNTDKVNAIGLCRGDLKSDACRSCLNYSRVFNLTQLCPNQKEAIVWFDKCMLRYSNRSIFGIMETYPPLNYLWNDVNATDVDQFNKVLFNLMRNLKGAAASGDSRRKYAADNATVSTFQTIYGIVQCTPDLSSQGCKDCLDGAITLIPECCNANRGVTVIGPSCNVRYQTYRFYDPTPILDPGTPAPAPLASPPPSPSSQGKSNTSRTAIVIAVPVVAIVVLVLCFIFIYLRARKPRHSLKNTEVDDDEIITNESLQFNFDTIRVATDDFSDANKLGQGGFGAVYRGRLSNGQVIAVKRLSRDSGQGDTEFKNEVLLLAKLQHRNLVRLLGFCLEGRERLLIYEFVPNKSLDYFIFDPTKKAQLDWERRYKIIGGIARGLLYLHQDSQLRIIHRDLKASNILLDGEMNPKISDFGLARLFVVDQTGGNTSTIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLVLEIVSGQKNSSIHHGESVEDLLSFAWRNWREGTATNIVDPSLNNSSRNEMMRCIHIGLLCVQENLANRPTMAAVTLMLNSYSQTLQVPSEPAFYMDSRTGSLPHVQSWEYNSRATISTESANESAQESVNEASITEPYPR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1193g00019 676 SMART serkin_6 344 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1193g00019 676 Gene3D Transferase(Phosphotransferase) domain 1 420 628 - -
Gabi1193g00019 676 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 674 - -
Gabi1193g00019 676 MobiDBLite consensus disorder prediction 653 676 - -
Gabi1193g00019 676 ProSitePatterns Protein kinases ATP-binding region signature. 350 372 IPR017441 GO:0005524
Gabi1193g00019 676 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 133 - -
Gabi1193g00019 676 Pfam Protein kinase domain 345 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1193g00019 676 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Gabi1193g00019 676 Pfam Salt stress response/antifungal 151 245 IPR002902 -
Gabi1193g00019 676 MobiDBLite consensus disorder prediction 257 277 - -
Gabi1193g00019 676 FunFam Cysteine-rich receptor-like protein kinase 17 313 419 - -
Gabi1193g00019 676 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Gabi1193g00019 676 Gene3D Phosphorylase Kinase; domain 1 306 419 - -
Gabi1193g00019 676 SUPERFAMILY Protein kinase-like (PK-like) 329 648 IPR011009 -
Gabi1193g00019 676 MobiDBLite consensus disorder prediction 653 669 - -
Gabi1193g00019 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Gabi1193g00019 676 ProSiteProfiles Protein kinase domain profile. 344 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1193g00019 676 Gene3D - 142 247 IPR038408 -
Gabi1193g00019 676 Gene3D - 27 132 IPR038408 -
Gabi1193g00019 676 FunFam Cysteine-rich receptor-like protein kinase 10 142 247 - -
Gabi1193g00019 676 CDD STKc_IRAK 350 615 - -
Gabi1193g00019 676 FunFam cysteine-rich receptor-like protein kinase 10 420 621 - -
Gabi1193g00019 676 ProSiteProfiles Gnk2-homologous domain profile. 140 247 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1193g00019 Gabi-Chr1193 146911 155608 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1193g00019 8 676 Receptor kinase-like Gene Family AT4G21410 50.653 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi1193g00019 Pkinase 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1193g00019 - - gmx:100791056 927.546