Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi1193g00014 ATGGCAACAGTTTCTTGGAGGTTGTTTTCCTTTCTTTGTTGTCTCCTTGTCATGATCATATCTCAAACCAGCGCCCAGCCAAATCACTGGTGCTTCAATGATAAAGGCAATTACACAGCCAATAGCACATATCAGACCAACCTCAACACCCTTCTAGCCAATCTCACTGCCAACACAGAAATCGACTATGGTTTCTACAATTTCTCATATGGCCAAAACACTGACAAAGTAAACGCCATTGGACTGTGCAGAGGAGATGTTAAGCCAGATGCATGCCGCAGCTGCCTCAACGATTCCAGAGGCAATCTCACACAGATTTGTCCGAACCAGAAAGAGGCAATTGTGTGGTTTGACATGTGCATGTTGCGCTACTCGAACCGCTCAATATTTGGCATCATGGAAACTTTACCAGCTATTTATATGTGGAACATAAACAATGCAACGGATGTGGATCAGTTCAAGCAAGTGCTGTTTAACTTGATGAGGAATCTAAAAGGCGCAGCTGCATTAGGTGACTCTCGTGGTAAGTATGCTACGGATAATGTAACTGGTCCAAATTTTCAAAGCATATATGGTCTTGTGCAGTGCACGCCTGATTTGTCATGGCAAGGCTGTAATGACTGCTTGGATGGGGCTATCTCGCAAATCCCAAGTTGTTGCAATAACAGAAGAGGTGGTAGAGTTGTTGGCCCCAGTTGTAATATTAGATACGAAAGCTACCGCTTTTACGATCCCACGTCAAGATTAGACCCAAGTATACCGCCACCGAGTGCAGGAAAGAGCAACACATCACAAACTGCCATCGTCATAGCAGTGCCGGTTGTTGCTGTTGTTGTTTTGGTGCTCTGTTTCATCTGCATCTATTTAAGAGCGAAGAAGCCAAGGAAATATTTTGAAACTGAAGTTGATGATGATGAAATTATAACCAATGAGTCATTGCAATTCAACTTTGATACCATACGAGTTGCTACAGATGACTTCTCAGATGCTAATAAACTCGGACAAGGTGGATTTGGAGCTGTTTACAGGGGTAGGCTCTCTAATGGACAAGTGATTGCAGTCAAAAGGTTGTCAAGAGATTCTGGCCAAGGAGATACGGAATTTAAGAATGAAGTGCTTTTATTGGCCAAGCTTCAGCACCGAAATTTAGTTAGACTACTTGGTTTCTGTCTGGAAGGAAGAGAAAGGCTACTCATCTATGAATTTGTTCCGAATAAAAGCCTTGATTACTTCATATTTGATCCAACCAAGAAAGCACAATTGGATTGGGAAAGGCGCTACAAAATCATTGGAGGTATTGCTAGAGGTCTTCTTTACCTTCATCAGGATTCACAACTGCGTATTATACATCGAGATCTCAAAGCGAGCAACATTCTCTTAGATGGAGAGATGAATTCTAAGATATCAGATTTTGGCTTGGCAAGACTTTTTGTTGTGGATCAAACAGGAGGAAATACAAATACAATCGTTGGAACCTATGGATATATGGCACCAGAGTATGCAATGCATGGACAGTTTTCAGTGAAATCAGATGTCTTTAGTTTTGGTGTACTGGTTCTTGAGATTGTTAGTGGCCAGAAAAACAGCAGCATTCATCATGGGGAGAGTGTAGAGGATCTACTGAGCTTTGCATGGAGAAACTGGAGGGAGGGGACAGCTACAAATATAGTAGATCCAACATTAAACAACAGTTCGCGAAATGAGATGATGAGATGCATCCACATTGGTTTACTCTGTGTTCAAGAAAATTTAGCTAACAGACCAACCATGGCTGCCGTTACACTCATGCTTAATAGCTATTCTCAGACTCTCCAGGTACCTTCCGAGCCTGCATTTTATATGGACAGTAGAACTGGAAGCCTTCCACACGTGCAATCATGGGAGTATAATTCAAGGGCAACAATATCAACTGAATCTGCAAATGAATCAGCTCAAGAATCGGTTAATGAGGCTTCAATTACTGAGCCATACCCTCGCTAG 1980 0.4222 MATVSWRLFSFLCCLLVMIISQTSAQPNHWCFNDKGNYTANSTYQTNLNTLLANLTANTEIDYGFYNFSYGQNTDKVNAIGLCRGDVKPDACRSCLNDSRGNLTQICPNQKEAIVWFDMCMLRYSNRSIFGIMETLPAIYMWNINNATDVDQFKQVLFNLMRNLKGAAALGDSRGKYATDNVTGPNFQSIYGLVQCTPDLSWQGCNDCLDGAISQIPSCCNNRRGGRVVGPSCNIRYESYRFYDPTSRLDPSIPPPSAGKSNTSQTAIVIAVPVVAVVVLVLCFICIYLRAKKPRKYFETEVDDDEIITNESLQFNFDTIRVATDDFSDANKLGQGGFGAVYRGRLSNGQVIAVKRLSRDSGQGDTEFKNEVLLLAKLQHRNLVRLLGFCLEGRERLLIYEFVPNKSLDYFIFDPTKKAQLDWERRYKIIGGIARGLLYLHQDSQLRIIHRDLKASNILLDGEMNSKISDFGLARLFVVDQTGGNTNTIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLVLEIVSGQKNSSIHHGESVEDLLSFAWRNWREGTATNIVDPTLNNSSRNEMMRCIHIGLLCVQENLANRPTMAAVTLMLNSYSQTLQVPSEPAFYMDSRTGSLPHVQSWEYNSRATISTESANESAQESVNEASITEPYPR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi1193g00014 659 MobiDBLite consensus disorder prediction 636 652 - -
Gabi1193g00014 659 ProSiteProfiles Gnk2-homologous domain profile. 135 242 IPR002902 -
Gabi1193g00014 659 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Gabi1193g00014 659 Pfam Salt stress response/antifungal 146 240 IPR002902 -
Gabi1193g00014 659 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Gabi1193g00014 659 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 657 - -
Gabi1193g00014 659 MobiDBLite consensus disorder prediction 636 659 - -
Gabi1193g00014 659 CDD STKc_IRAK 333 598 - -
Gabi1193g00014 659 SUPERFAMILY Protein kinase-like (PK-like) 312 631 IPR011009 -
Gabi1193g00014 659 Pfam Protein kinase domain 328 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1193g00014 659 Gene3D - 26 128 IPR038408 -
Gabi1193g00014 659 Gene3D - 136 242 IPR038408 -
Gabi1193g00014 659 FunFam Cysteine-rich receptor-like protein kinase 17 297 402 - -
Gabi1193g00014 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Gabi1193g00014 659 SMART serkin_6 327 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1193g00014 659 ProSiteProfiles Protein kinase domain profile. 327 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi1193g00014 659 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Gabi1193g00014 659 Gene3D Transferase(Phosphotransferase) domain 1 403 611 - -
Gabi1193g00014 659 Gene3D Phosphorylase Kinase; domain 1 289 402 - -
Gabi1193g00014 659 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Gabi1193g00014 659 FunFam cysteine-rich receptor-like protein kinase 10 403 604 - -
Gabi1193g00014 659 FunFam Cysteine-rich receptor-like protein kinase 10 137 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi1193g00014 Gabi-Chr1193 104458 107854 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi1193g00014 7 659 Receptor kinase-like Gene Family AT4G21410 49.420 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi1193g00014 Pkinase 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi1193g00014 - - gmx:100782800 945.266